Eublepharis macularius (Leopard gecko): 129324633
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Entry
129324633 CDS
T09084
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc04620
Toll-like receptor signaling pathway
emc04621
NOD-like receptor signaling pathway
emc04622
RIG-I-like receptor signaling pathway
emc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
129324633 (TRAF3)
04621 NOD-like receptor signaling pathway
129324633 (TRAF3)
04622 RIG-I-like receptor signaling pathway
129324633 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129324633 (TRAF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
TRAF3_RING
zf-TRAF
Cast
zf-C3HC4
ATG16
Spc29
zf-C3HC4_2
Med28
FliJ
GAS
Sina_ZnF
Tropomyosin
KxDL
T3SSipB
DUF1664
Crescentin
SPATA24
DUF3450
BLOC1_2
LRRFIP
DUF16
Motif
Other DBs
NCBI-GeneID:
129324633
NCBI-ProteinID:
XP_054827950
UniProt:
A0AA97IYF8
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All DBs
Position
2:complement(22122943..22161591)
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AA seq
540 aa
AA seq
DB search
MDTSKKTDPPVSVETVQQKANPERSPITSIYVPEQGGYKEKFVNAVEDKYKCEKCHLILC
NPRQTECGHRYCETCMVTVLSTASPKCAACQEIIAKEKVFKDNCCRRELLALQIFCRNEN
KGCREQLTLGQLLNHLKNDCLFEELPCPRADCKEKILRKDLPDHVGKNCKYRETTCKYCN
SQVPMIMIQLNAHLSECINAPSTCSFKRYGCIFQGTNQQVKAHEATSAVQHVDLLKEWSN
CLENKVAMLQNESLEKNKSIQTLHNQICTFEIEIERQKEMLRSNESKIHHLQRVIDSQAE
KLKELDKEIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSTGQGGRNAGLLESQLSRH
DQMLSVHDIRLADMDLRFQVLETASYNGILIWKIRDYKRRKQEAVMGKTLSLYSQPFYTG
YFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGPSRRHL
GDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggacacaagcaagaagactgatcccccagtgtcagtggaaacagtacagcaaaaggcc
aaccctgaacgcagcccgataacatcaatttatgtaccagagcaaggtggttacaaagag
aagtttgtaaatgccgtggaggacaaatacaagtgtgaaaagtgccatctcatcttgtgc
aatccaagacagacggaatgtgggcatcgctattgtgagacttgcatggtcactgtacta
agtaccgcaagtccaaagtgtgcagcatgtcaagaaataatagcgaaagagaaggtgttt
aaggataattgttgtaggagagagcttcttgctcttcagatattctgcagaaatgaaaat
aaaggttgccgagaacaattgaccttgggacagttgcttaaccatctgaaaaatgattgt
ctgtttgaagaacttccatgtcctcgtgctgattgtaaagagaaaattctgaggaaagac
ttgcctgatcatgtaggaaaaaactgtaaatatagggaaacaacatgtaaatattgtaac
agccaagttccaatgattatgatacagttgaatgcacatttgtctgaatgtattaatgcc
ccaagtacctgtagttttaagcgttatggctgcatttttcagggaacaaatcagcaagtt
aaagcacatgaagccacatcagcagtgcagcatgtagacttattgaaagagtggagtaat
tgtctagaaaataaggtggccatgctccagaatgaaagcttggaaaagaacaagagtata
caaactttacataatcaaatttgtacctttgaaatagaaattgagagacaaaaggaaatg
ctacggagtaatgaatctaaaatacatcacttgcagcgggtgatagacagccaagccgag
aagctgaaagaactggacaaagagatacgtcccttccgacagaattgggaagaagcagat
agtatgaagagcagtgtggagtccctccagaacagagtgactgagctggaaagtgttgat
aagagtaccgggcaaggaggtagaaatgcaggtttgctggaatcacaactgtccaggcac
gatcagatgctgagtgttcatgacatccgactagccgacatggacctccggtttcaagtt
ctggaaactgccagttacaatggaatactaatctggaaaatccgagattacaaacgtcgg
aagcaagaagccgtgatgggaaagactttgtccttatacagccaacctttttatacagga
tactttggctataagatgtgtgccagagtttacctcaatggcgatgggatgggcaaaggg
acgcacctgtccttgttctttgtcataatgcggggagaatacgatgcattgcttccatgg
ccgtttaagcagaaagttaccctaatgctgatggatcagggaccgtctcggcgtcattta
ggagatgctttcaagccagatccaaacagcagtagtttcaagaaacccaccggagaaatg
aatattgcttctggctgcccagtctttgttgcacaaactgttctagaaaatggaacctat
attaaagatgatactatttttattaaagtcatagtggatacatctgacctaccagacccc
tga
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