Eublepharis macularius (Leopard gecko): 129328775
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Entry
129328775 CDS
T09084
Symbol
LSM3
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03018
RNA degradation
emc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129328775 (LSM3)
09123 Folding, sorting and degradation
03018 RNA degradation
129328775 (LSM3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
emc03019
]
129328775 (LSM3)
03041 Spliceosome [BR:
emc03041
]
129328775 (LSM3)
Messenger RNA biogenesis [BR:
emc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129328775 (LSM3)
mRNA degradation factors
5'-3' decay
Lsm complex
129328775 (LSM3)
Spliceosome [BR:
emc03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
129328775 (LSM3)
Complex C
U2 snRNP components
129328775 (LSM3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
vATP-synt_E
RimP_C
Motif
Other DBs
NCBI-GeneID:
129328775
NCBI-ProteinID:
XP_054834024
UniProt:
A0AA97JB58
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All DBs
Position
4:125381882..125387682
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AA seq
102 aa
AA seq
DB search
MADEVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagtggaccagcaacaaactaccaatactgtagaggaacccttggatctc
atcagactcagtcttgatgagagaatatatgtgaaaatgagaaatgacagagaacttcga
ggcaggttacatgcttatgaccagcacttaaatatgattctgggtgatgtcgaagagact
gtgacaacaatagagatcgatgaagaaacctacgaagagatttataaatctaccaagagg
aatatccccatgctgtttgtcagaggagatggagttgtacttgtagctcctcccctgagg
gttggctga
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