Eublepharis macularius (Leopard gecko): 129328847
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Entry
129328847 CDS
T09084
Symbol
TNF
Name
(RefSeq) tumor necrosis factor
KO
K03156
tumor necrosis factor superfamily, member 2
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc04010
MAPK signaling pathway
emc04060
Cytokine-cytokine receptor interaction
emc04150
mTOR signaling pathway
emc04210
Apoptosis
emc04217
Necroptosis
emc04350
TGF-beta signaling pathway
emc04620
Toll-like receptor signaling pathway
emc04621
NOD-like receptor signaling pathway
emc04622
RIG-I-like receptor signaling pathway
emc04625
C-type lectin receptor signaling pathway
emc04920
Adipocytokine signaling pathway
emc05132
Salmonella infection
emc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129328847 (TNF)
04350 TGF-beta signaling pathway
129328847 (TNF)
04150 mTOR signaling pathway
129328847 (TNF)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
129328847 (TNF)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
129328847 (TNF)
04217 Necroptosis
129328847 (TNF)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
129328847 (TNF)
04621 NOD-like receptor signaling pathway
129328847 (TNF)
04622 RIG-I-like receptor signaling pathway
129328847 (TNF)
04625 C-type lectin receptor signaling pathway
129328847 (TNF)
09152 Endocrine system
04920 Adipocytokine signaling pathway
129328847 (TNF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129328847 (TNF)
09171 Infectious disease: bacterial
05132 Salmonella infection
129328847 (TNF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
emc04052
]
129328847 (TNF)
00536 Glycosaminoglycan binding proteins [BR:
emc00536
]
129328847 (TNF)
Cytokines and neuropeptides [BR:
emc04052
]
Cytokines
Tumor necrosis fators
129328847 (TNF)
Glycosaminoglycan binding proteins [BR:
emc00536
]
Heparan sulfate / Heparin
Cytokines
129328847 (TNF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
129328847
NCBI-ProteinID:
XP_054834127
UniProt:
A0AA97J9J7
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Position
4:162933201..162937553
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AA seq
240 aa
AA seq
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MSSEHLVYDVEKGSNVIVVRDPPHKESHWKCLSICSFLLLIGAVTVFTLLQFKAFGTSEN
QDSIGSGNPFPEGMPQTLKVQAVTSGKPAIHAIASRTHKNNLIWITDLAPAMTKNGMRLD
KKENVLVVPSSGLYFVYSQLLFHGESCSGHTQNSLLLTHKIFRRSKEYSGEDVELMKAVK
SVCDGGNVSPDLNKLWFESIYQGGVFLLQEGDKLGSNTESAQYLNWDREGQVYFGAIALD
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgagctccgagcatttggtgtacgacgtggagaagggcagcaacgtgatcgtggtgcgt
gacccaccccacaaagaaagccactggaagtgtttgagcatctgctctttcctgctcctt
attggggctgtcactgttttcactctgctgcagttcaaagcatttgggacctcggaaaac
caggattctataggaagtggaaatccctttcctgaaggaatgccacagacactgaaagtg
caagctgtcacatctgggaaacctgctatccatgccattgcatccagaactcataagaat
aacctgatttggattaccgatttggcacctgccatgacaaagaatggtatgcggctcgat
aagaaggagaatgttctcgtggtcccttcctctggtctctattttgtctattctcagctc
ttgttccatggagaaagctgcagtggacacacccaaaactctctactgctcactcacaaa
atctttaggaggtccaaagagtacagtggggaggatgtggaactgatgaaggccgtcaag
tctgtctgtgatggtggaaacgtcagcccagacctcaacaagctatggtttgaatccatc
tatcaagggggtgttttcctgctacaagaaggggacaagctggggtcaaacacagaatca
gcccaatatctgaactgggatcgagagggacaagtgtattttggagctatagccttggat
taa
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