Eublepharis macularius (Leopard gecko): 129328938
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Entry
129328938 CDS
T09084
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc00514
Other types of O-glycan biosynthesis
emc04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
129328938 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
129328938 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
emc01003
]
129328938 (RFNG)
Enzymes [BR:
emc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
129328938 (RFNG)
Glycosyltransferases [BR:
emc01003
]
Glycan extension
O-Glycan
129328938 (RFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
129328938
NCBI-ProteinID:
XP_054834249
UniProt:
A0AA97JBM2
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Position
4:complement(28136143..28156493)
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AA seq
403 aa
AA seq
DB search
MSFSCIRFSKICFLLSVIFCAVLLLLLPKFQGNLRPRSYPLPHPPSVINASNKSEVQLQQ
AESSSIENLSDETNNIVSFVKEELIQEWSPHVTDIGRSNQKVNSKMHDNLFNPWYNGVED
HVGSAKVSVKEKLELKDIFIAVKTTRKYHKTRLNLLFQTWISKAQGQTFIFTDWEDRELR
HRAGDHMINTNCSAVHTRQALCCKMSVEYDKFLESGQKWFCHVDDDNYVNLQNLLRLLSA
FSHSQDVYVGRPSLDHPIEAVDHVRNDGSTTVKFWFATGGAGFCISRGLALKMSPWASLG
SFISTAERIRLPDDCTIGYIIEGLLEVKLLHSPLFHSHLENLQRLRGEAVLEQVTLSYGG
PENKHNVVSVGEMFSVQQDPTRFKSVHCRLYPDTAWCPTEPVK
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgagcttttcctgcattcggttcagtaagatctgcttcctgctctcggttatcttttgc
gcagtcctgctcttgctactccccaaattccagggcaatttgagacctagaagttatcca
ctgccacatccaccttctgttatcaatgcttcgaacaagagtgaagtccagttgcagcag
gcagagtcgagctcaattgagaatttgagtgatgagactaacaatattgtgtcctttgtg
aaagaggaactaatacaagaatggagccctcacgtcacagacattgggagatccaaccag
aaagttaacagcaagatgcatgataacctatttaatccatggtataatggggtggaagat
catgtgggatctgccaaagtctctgtgaaggaaaagttggagttgaaggatatctttatt
gctgtgaaaacaacaagaaaataccataaaacaaggttgaacttgctcttccaaacatgg
atttccaaggcccaggggcagacatttatatttacagactgggaggatcgggagctgcgt
cacagagcaggggatcacatgatcaacaccaactgctcagctgttcacacccgccaagca
ctctgttgcaagatgtctgtggaatatgataaatttctagaatctgggcaaaagtggttt
tgtcatgtggatgatgacaactatgtgaatctgcaaaatctcctgcgtcttctgtctgcc
ttttcacacagccaagatgtctatgttgggagaccaagtttagatcaccccattgaagcg
gtagatcatgtccggaatgatggatcaaccactgtgaagttctggtttgccacaggcgga
gcaggattctgcatcagcagaggccttgccctcaaaatgagcccctgggctagcttagga
agcttcatcagcactgccgagaggattcgcctccctgatgactgcacaattggctacata
attgaagggttgttggaagtgaagttgctgcacagccccttgttccactcacacttggaa
aacctgcagcgactacgtggtgaagcagtgctcgaacaggttaccttgagctatggtggt
cctgagaacaagcataatgttgtgagtgtgggagaaatgttcagtgtccagcaagaccca
acccgattcaaatctgtccactgccgcctctatcctgacactgcatggtgccccactgaa
ccggtgaaatga
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