Eublepharis macularius (Leopard gecko): 129335832
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Entry
129335832 CDS
T09084
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
emc
Eublepharis macularius (Leopard gecko)
Pathway
emc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
129335832 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
emc03400
]
129335832 (TDG)
Enzymes [BR:
emc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
129335832 (TDG)
DNA repair and recombination proteins [BR:
emc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
129335832 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
CARMIL_C
Motif
Other DBs
NCBI-GeneID:
129335832
NCBI-ProteinID:
XP_054844622
UniProt:
A0AA97L9N9
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Position
9:30350779..30364238
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AA seq
398 aa
AA seq
DB search
MEADGPGRYYTPLQPGFYPFTFHEMMTASPNMEMMNEQQAVQGVLDPNFIQEPLQAATKG
RKRKNKSTEPKKPAAKAAKSKGKQEKITDTFKVKRKVDRFNGVSEAELLTKTLPDILTFN
LDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFLAGLSEQQLNHMDDHTLPHKYGIGFTN
MVERTTPGSKDLSSKEFREGGRILVQKLQKYQPKIAVFNGKCIYDIFSKEVFGVKVKKLE
FGLQPHKVPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKELRDQLKGITSTTEVQEV
QYTFDLQLAQEEAKKMAVKEEKYDPGYEAAYGGAYSERTSGETEPCNFSSNGTASNAEYS
SGSSFGDVPNGQWMTQSFTDQIPEFNNCRPQEEQENNG
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggacggccccgggaggtattatactcctcttcagcctggattttatcctttt
actttccatgaaatgatgactgcgtcaccaaacatggagatgatgaatgagcaacaagct
gttcagggagttttggatccaaacttcattcaggaacctcttcaagctgctacaaaagga
agaaagagaaaaaataaatctactgaacccaaaaagcctgctgctaaagctgccaagtca
aaaggcaagcaagagaaaatcacagacactttcaaagtcaaaaggaaagtggatcgtttt
aatggtgtatctgaagctgaattgctgaccaaaacactgcctgatatactgactttcaat
ctggacattgtaattattggtataaatccaggcttgatggcagcctacaaagggcatcat
tatccaggacctggcaaccacttttggaagtgtctgtttctggccggtcttagtgaacaa
cagctgaaccatatggatgaccatacattaccacataaatatggtattggatttacaaat
atggtggaaaggacaacaccaggtagcaaggacctttccagcaaagagtttcgggaagga
ggacgcattctggtgcagaaattacagaagtatcaacctaaaatagcagtttttaatgga
aaatgtatttatgatatttttagtaaagaggtttttggagtaaaggttaaaaagctggaa
tttggactgcagccacataaagttccagacacagaaacactttgctatgttatgccatca
tccagtgcaagatgtgctcagtttcctcgtgcacaagataaagttcattattatataaag
ctgaaagagttaagagatcagctgaaaggcattacatcaaccacagaggtccaagaagtg
cagtacacctttgacttgcaacttgcacaagaggaagcaaagaaaatggccgtcaaagaa
gaaaaatacgatccaggttacgaagcagcctatggaggagcttacagtgaaagaacttcc
ggtgagactgaaccatgtaacttttcttcaaatggaacagcatccaatgcagaatatagc
agtggatcttcctttggtgatgtccccaatggacagtggatgacacaatccttcacagac
cagattcctgaatttaacaactgtaggccacaagaggagcaagaaaacaatggttaa
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