KEGG   Eublepharis macularius (Leopard gecko): 129345681
Entry
129345681         CDS       T09084                                 
Name
(RefSeq) actin, cytoplasmic type 5
  KO
K05692  actin beta/gamma 1
Organism
emc  Eublepharis macularius (Leopard gecko)
Pathway
emc03082  ATP-dependent chromatin remodeling
emc04145  Phagosome
emc04210  Apoptosis
emc04510  Focal adhesion
emc04520  Adherens junction
emc04530  Tight junction
emc04810  Regulation of actin cytoskeleton
emc04814  Motor proteins
emc04820  Cytoskeleton in muscle cells
emc05100  Bacterial invasion of epithelial cells
emc05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:emc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    129345681
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    129345681
  09143 Cell growth and death
   04210 Apoptosis
    129345681
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    129345681
   04520 Adherens junction
    129345681
   04530 Tight junction
    129345681
  09142 Cell motility
   04814 Motor proteins
    129345681
   04820 Cytoskeleton in muscle cells
    129345681
   04810 Regulation of actin cytoskeleton
    129345681
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    129345681
   05100 Bacterial invasion of epithelial cells
    129345681
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:emc03021]
    129345681
   03019 Messenger RNA biogenesis [BR:emc03019]
    129345681
   03036 Chromosome and associated proteins [BR:emc03036]
    129345681
   03029 Mitochondrial biogenesis [BR:emc03029]
    129345681
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:emc04812]
    129345681
   04147 Exosome [BR:emc04147]
    129345681
Transcription machinery [BR:emc03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     129345681
Messenger RNA biogenesis [BR:emc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     129345681
Chromosome and associated proteins [BR:emc03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     129345681
    NuA4 complex
     129345681
  Chromatin remodeling factors
   BAF complex
    129345681
   PBAF complex
    129345681
   GBAF(ncBAF) complex
    129345681
   SWR1 complex
    129345681
Mitochondrial biogenesis [BR:emc03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    129345681
Cytoskeleton proteins [BR:emc04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     129345681
Exosome [BR:emc04147]
 Exosomal proteins
  Proteins found in most exosomes
   129345681
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 129345681
NCBI-ProteinID: XP_054858885
UniProt: A0AA97KMX8
LinkDB
Position
18:33627103..33630127
AA seq 376 aa
MADEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS
YELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVL
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYDESGPSIVHRKCF
NT seq 1131 nt   +upstreamnt  +downstreamnt
atggcagatgaggaaattgctgctctggttgtggacaatggatccggaatgtgcaaagca
ggatttgcaggagacgatgcccccagggcagtcttcccttccatcgtagggaggcccagg
caccagggggttatggtgggcatgggccagaaagacagctatgtgggggatgaggcacag
agcaagaggggcattctgaccctgaagtaccctattgaacatggcatcgtcaccaactgg
gatgacatggagaagatctggcaccataccttctataatgagttgcgggttgccccagaa
gaacacccagtgttacttaccgaagctcccctaaatcccaaagccaacagggagaagatg
acccagattatgtttgaaaccttcaacacaccagctatgtatgtggccatccaggcagtg
ctatccctgtatgcctctggccgtacaactgggatagtcatggactctggagatggggtc
acccacactgtacccatctatgagggttatgcgctgccccatgccatcctccgactggac
ctggctggccgtgacttaactgactacctcatgaagatcctgactgagaggggctacagc
tttacaaccacagctgagagggagattgtgcgagatatcaaagagaagctctgctatgtt
gccctggactttgagcaggagatggccacagctgcctcatcatcatctttggagaagagc
tatgagctgcctgatggccaggtgatcaccattggcaatgagcgcttcaggtgtcccgag
gccctcttccagccctccttcctaggcatggagtcctgtggcatccacgaaaccactttc
aactccatcatgaagtgtgacgtggacatccgaaaggatttgtatgccaacacggtgctt
tcaggtggtaccaccatgtaccctggcatcgctgacagaatgcagaaggagatcactgcc
ttggcccccagcactatgaagatcaagatcattgccccaccagagcgcaaatattctgtc
tggattggtggctccattttggcatctctctccaccttccagcagatgtggatcagcaag
caagagtatgatgagtctggcccctcaattgtccaccgtaaatgtttttaa

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