Mesoplasma melaleucae: EMELA_v1c01880
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Entry
EMELA_v1c01880 CDS
T05235
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
eml
Mesoplasma melaleucae
Pathway
eml03030
DNA replication
eml03410
Base excision repair
eml03420
Nucleotide excision repair
eml03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EMELA_v1c01880 (ligA)
03410 Base excision repair
EMELA_v1c01880 (ligA)
03420 Nucleotide excision repair
EMELA_v1c01880 (ligA)
03430 Mismatch repair
EMELA_v1c01880 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eml03032
]
EMELA_v1c01880 (ligA)
03400 DNA repair and recombination proteins [BR:
eml03400
]
EMELA_v1c01880 (ligA)
Enzymes [BR:
eml01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
EMELA_v1c01880 (ligA)
DNA replication proteins [BR:
eml03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EMELA_v1c01880 (ligA)
DNA repair and recombination proteins [BR:
eml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
EMELA_v1c01880 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EMELA_v1c01880 (ligA)
MMR (mismatch excision repair)
DNA ligase
EMELA_v1c01880 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EMELA_v1c01880 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
Nlig-Ia
BRCT_2
PTCB-BRCT
5_3_exonuc
HHH
LEA_2
Motif
Other DBs
NCBI-ProteinID:
ATZ17766
UniProt:
A0A2K8NW36
LinkDB
All DBs
Position
181950..183950
Genome browser
AA seq
666 aa
AA seq
DB search
MTKEQAIILINDLRKKLNKWAKEYYVLDNPSVDDTEYDQAIHQLIDLETQFPELITSDSI
TQKVGGIVSDKFEKYTHKYPMLSLGDIFSWDEFLNFNKQVAKITGTKDNEYTAELKIDGL
SISLIYKNNVLQNGVTRGDGKVGESVTTNVKTIKSIPLSIPVKDEIEIRGEVFLSKTEFA
KINEERLINGEQLFANPRNAAAGTLRQLDSKIVASRNLDAYLYYYFNETNPINTQFESIN
QIKQLGLKVNPETKICKSLDEIKAYIEYYTEKRNELDYEIDGIVFKLNDKNLQEEVGYTA
KTPKWAIAYKFSAEVKETKLLDIFPTVGRTGKITYNAKLEPVQIAGTTVSAASLNNAEYI
MAKDLRVNAKVKVKKAGDIIPEVINAIKDNDFENLPKWEKAEKCPACGEGLEKTATEVDQ
FCVNFNCPAQILRSLEHFASRGAANIVGLGGQTIKKLFEEKLITNIADIFKVEEHKEDII
NFEKFGEKSFENLVASIERAKHNSLEKTLFGLGIRHIGSKTALTLAEIYQNIDNLKDATY
EELSAINSLGEVLAASIVDWFKIESNLQLINQLKTFNVNFEYLGEAKNTDSLISNKSFVI
TGTLSNSRDYYKDIIELNNGKVIGYVSKKTDYLLAGKNAGSKLTKAEELNVKVINEKEFF
EILKGE
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgactaaggaacaagcaataatattaattaatgatttacgtaaaaaacttaataaatga
gctaaagaatattatgtgttagataacccaagtgttgatgatacagaatatgatcaagca
attcatcaattaattgatcttgaaacacaattccctgaattaattacatcagactcaatt
acacaaaaagttgggggtattgttagtgataaatttgaaaaatatacccacaaatatcca
atgttaagtcttggagatatttttagttgagatgagtttttaaactttaataaacaagtt
gctaaaatcaccggtactaaagataacgaatacacagctgaacttaaaattgatggttta
tcaatttcattaatttataaaaacaatgtcttacaaaatggggtaactcgtggtgatggt
aaagttggtgaaagtgtaacaactaatgttaaaacaattaaatctattccactttcaatt
cctgtaaaagatgaaattgagattagaggagaagttttcttatctaaaactgaatttgca
aaaattaatgaagaaagattaattaatggtgaacaactatttgctaatccaagaaatgct
gcagcaggaactttaagacaattagattcaaagattgttgcaagtagaaatcttgatgct
tatctgtattattactttaatgaaacaaatccaattaacacacaatttgagtcaattaac
caaataaaacaattaggtttaaaagtaaatccagaaacaaaaatatgtaaatcactagat
gaaattaaagcatatattgaatattacactgaaaaaagaaatgaattagattatgaaatt
gatggaatcgtatttaagttaaatgataaaaatttacaagaagaagttggatatactgca
aaaacaccaaaatgagcaattgcttataaattttcagcagaagttaaagaaactaaatta
ctagatattttcccaacagttggtcgtacaggtaaaattacatacaacgcaaaattagaa
ccagtgcaaattgccggaacaacagtttcagcagcatcattaaacaatgctgaatatatc
atggcaaaagatttaagagttaatgcgaaagtgaaagttaaaaaagctggagatattatt
ccagaagttattaatgcaattaaagataatgactttgaaaacttacccaaatgagaaaaa
gctgaaaaatgtccagcatgtggtgagggattagaaaaaacagcaactgaagttgatcaa
ttttgtgttaacttcaattgccctgctcaaatcttaagaagtttagaacactttgcaagt
agaggtgccgcaaatattgttggtttaggcggtcaaacaattaaaaaattattcgaagaa
aaattaattacaaatattgcagatatatttaaagttgaagagcataaagaagacattatt
aattttgaaaagtttggagaaaaaagttttgagaatttagttgcatcaattgaacgggca
aaacataattcacttgaaaaaacattgtttggattagggattagacatattggatctaaa
acagctttaactcttgctgaaatatatcaaaacattgataatcttaaagatgcaacttat
gaagaattaagtgcaattaattctttgggagaagttttagcagcatcaattgtagattga
tttaaaatcgaatctaatttacaattaataaatcaattaaaaacatttaatgtgaatttt
gaatatttaggagaagctaaaaatactgattctctaattagtaataaatcatttgtcatt
acaggtacattatcaaattcaagagattattataaagatataattgaattgaataatggt
aaagtaattggttatgtttctaaaaaaactgattatttattagctggtaaaaatgctgga
agtaaattaactaaagcagaagaattaaatgttaaagtaattaatgaaaaagaatttttt
gaaattttaaaaggagaatag
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