Emydura macquarii macquarii (eastern short-necked turtle): 137158464
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Entry
137158464 CDS
T11697
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
emq Emydura macquarii macquarii (eastern short-necked turtle)
Pathway
emq03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
emq00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137158464 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
emq03041
]
137158464 (EFTUD2)
Spliceosome [BR:
emq03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
137158464 (EFTUD2)
Complex C
U5 SnRNP specific factors
137158464 (EFTUD2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
137158464
NCBI-ProteinID:
XP_067412333
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDDDDELGRDAKDLDELDDDDDDDDIGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPLTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSFLFNVMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFVLEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKIKIEHTYTGGIDSDLGEAMSECDSDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacacagacctgtacgatgagtttgggaattacatcgggccagagctcgactcggat
gatgacgatgatgaactgggcagagatgccaaagatcttgatgagcttgacgacgatgat
gacgatgatgatataggagatcatgatgaagatcatcctggaatggaggtggtgctgcat
gaagataagaaatactatccgactgctgaagaggtttatgggcctgaggtagagaccata
gtgcaggaggaagatacacagcctctcactgagcctattattaaacctgtgaaaaccaag
aaattctccctgatggagcagacattgcctctcactgtgtatgagatggattttctggca
gatctgatggacaactctgagctgattcggaatgtgaccctgtgcgggcatctccaccat
ggcaagacttgttttgtggattgcctgatagagcagacgcacccggagatcaggaagcgc
tacgatcaggacctttgctacactgacatactgttcacggagcaagagaggggtgttgga
atcaagagcaccccggtgactgttgttctaccagacaccaaggggaaatcctttctcttc
aacgtcatggacacgccaggccatgtgaacttttctgatgaggtcactgccggccttcgt
atttcagacggagttgtgcttttcattgacgcagccgagggggttatgctgaacacggag
cggctgatcaagcacgcagtgcaggagaggctggcagtgaccgtgtgcattaataagata
gatcggctgatcttggagctgaagcttccccctacggatgcctattacaaactccgacac
atagtagatgaggtcaatggcttgatcagcatgtattccactgacgagaacctgatcctc
tcccctcttctggggaacgtctgcttctccagttcccagtacagcatctgcttcacgctg
ggctcctttgcaaaaatttatgccgacacatttggagatatcaattaccaggagtttgca
aagcggctttggggcgacatctacttcaaccccaagacacgaaagttcactaaaaaggcc
ccgaccagcagttcccagcggagctttgtggagtttgtcctagaacccctgtacaagatc
ctggctcaggtggttggtgatgtggacaccaccctgccccggactctggatgagctgggc
atccacctgaccaaagaggagctgaagttgaacattcggcccctgctaaggcttgtctgc
aagaagttcttcggggagttcacaggctttgtggacatgtgtgtgcagcacattccctcc
ccgaaggtgggagccaagatcaaaatcgagcacacctacaccggcggcattgactcagac
ctgggggaggccatgagcgagtgtgactcggatggtccactaatgtgtcacaccacgaaa
atgtacagcacagacgacggggttcagttccacgccttcggcagggtgctgagtgggacc
atccatgcagggcagcccgtgaaggtactgggagaaaactacacattggaggatgaagag
gattcccagatctgcactgtgggacgcctgtggatctcggtagcaagataccacatagag
gtgaaccgggtccctgctggcaactgggtactaatagagggggtggaccagcccattgtg
aagactgcaaccatcacagagcctagaggcaatgaggaggctcagatcttccgtccgttg
aagttcaacaccacgtcggtcatcaaaatagccgtggagccggtcaacccttcggagctc
cctaaaatgctggatggcctgcggaaagtcaacaagagctacccgtcactcaccaccaag
gtggaagaatctggggagcacgtgatcctggggactggggagctgtacctggactgtgtg
atgcacgacttacggaagatgtattcagagattgatatcaaggttgctgatccagttgtg
acgttctgtgagaccgttgtggaaacttcctccctgaagtgttttgctgagacgcccaat
aagaagaacaagatcacaatgattgctgagccgctggagaaggggcttgcggaggacatt
gagaatgaggtggtccagatcacctggaacaggaagaagctgggcgagttcttccagacc
aagtatgactgggatttgctggctgcccgctccatctgggcctttgggccagacgccact
ggcccaaacatcctggtagatgacacgctgccctcggaggtggataaggccctgctgggc
tctgtgaaggacagcatcgtacaggggtttcagtggggtaccagagaagggcccctctgt
gacgaattgatccgcaacgtgaagtttaagatcctcgatgcagtcattgctcaggagccg
ctacaccggggcggagggcagattatcccaacagcaaggagggttgtgtactccgccttc
ctcatggccaccccccgactgatggagccgtactactttgtggaggtccaggcccctgct
gactgtgtgtccgcagtgtacactgtgctggccaggcggagaggtcatgtgactcaggac
gctccaatcccaggctccccgctttataccatcaaagcctttatcccagccattgactcg
tttgggtttgagactgacttgaggactcacacgcagggacaagctttctctctgtccgtc
tttcaccactggcagatcgtgcctggagaccccttggacaagagcatcgtcatccggccc
ttagagccacagccagcaccgcacctggccagagagttcatgatcaagaccaggcgcagg
aagggcttgagtgaggacgtgagtattagcaagttcttcgacgacccgatgttgctggag
ctggccaagcaggacgttgttctgaactaccccatgtga
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integrated database retrieval system
