Eubacterium maltosivorans: CPZ25_017565
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Entry
CPZ25_017565 CDS
T05996
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
emt
Eubacterium maltosivorans
Pathway
emt03030
DNA replication
emt03410
Base excision repair
emt03420
Nucleotide excision repair
emt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
emt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CPZ25_017565 (ligA)
03410 Base excision repair
CPZ25_017565 (ligA)
03420 Nucleotide excision repair
CPZ25_017565 (ligA)
03430 Mismatch repair
CPZ25_017565 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
emt03032
]
CPZ25_017565 (ligA)
03400 DNA repair and recombination proteins [BR:
emt03400
]
CPZ25_017565 (ligA)
Enzymes [BR:
emt01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CPZ25_017565 (ligA)
DNA replication proteins [BR:
emt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CPZ25_017565 (ligA)
DNA repair and recombination proteins [BR:
emt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CPZ25_017565 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPZ25_017565 (ligA)
MMR (mismatch excision repair)
DNA ligase
CPZ25_017565 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CPZ25_017565 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
PTCB-BRCT
RNA_pol_A_CTD
BRCT_2
HHH
Motif
Other DBs
NCBI-ProteinID:
QCT73060
UniProt:
A0A4P9CBK8
LinkDB
All DBs
Position
3768616..3770616
Genome browser
AA seq
666 aa
AA seq
DB search
MNEELKQAEAKISQLKKQIEENNVRYYDKDAPVIPDYEYDRMMRELISLETAYPQFLTPD
SPSQRVGGAPSEAFEKVNYTTPKLSLSNAFNAGDLRDFDTRIRKVYPDVEYCVEHKFDGL
TVVLDYENGLLARGSTRGDGVTGENVTQNLKTVKTIPLRLTEPVTLEVRGEVLIYKEDFE
QLNAAREEQGEPLFANPRNAAAGSIRQLDPKLAAERPLDIFVFNLEYCENRTFETHKESF
DFLTHCGFKTSEVKLYSSMEDIITYIEEMEHGGREALPYEIDGMVIKVNNLAERERLGDT
SKSPRWAIAYKFSPEQTVTTVRDITVQVGRTGALTPVAELEPVLLAGSMISRATLHNEDY
IIDKDIRIGDKVVIQKAGDVIPEVDHSIPEERTGAEVIFTMPTHCPVCGSKTYRVPGEAV
TKCLNMDCPAQVFRKIVHFASRDAMNIDGMGPAVVRQLLDNELIHTIVDIYHVSNRREDL
TGLEKMGEKSVDNLINAIEDSKSRPLSKVVFALGIPLVGANGAKILASHFGSMDALMEAS
EEELTEIYDIGGKMAVEIVDFFKTDANRRIVDGLREAGVNMTENTARATAELAGKTFVLT
GTLPTMGRREAKEILESHGAKVSGSVSKKTDYVLAGENPGSKAEKAMSLDVPVIDEEAFK
KMVGLE
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagaattaaaacaggctgaagccaaaatcagccagcttaaaaaacaaattgag
gaaaacaacgtccgttattatgataaggacgcgcccgtcattccagactacgagtacgac
cgcatgatgcgggagctcatcagtctggagactgcctatccgcagtttttgacacctgat
tcgccgagccagcgtgtgggcggcgcgccgtcagaggcctttgagaaagtgaactacacc
acgcctaagctcagcctcagcaacgcttttaacgccggggacctgagggactttgatacc
cgtatccgcaaggtctaccccgatgtggagtactgtgtcgagcataaattcgatggcctg
accgttgtgttagactacgaaaacggactgctggcccgcggctctacccgcggcgacggc
gtgaccggcgaaaatgtcacccagaatctgaagacggtcaagaccattcccctgcgcctc
acagagccggtgaccctggaggtccggggggaggtgctgatctataaggaggactttgag
cagctgaacgctgcgcgggaggaacagggcgagcccctgttcgccaatcccagaaacgcc
gccgcaggctctatccgccagcttgaccctaaactggcggccgaaaggcctctggacatc
tttgtatttaacctggaatactgcgagaaccggaccttcgagacccataaggaaagcttt
gatttcctcacacactgcggttttaaaaccagtgaggtgaagctttacagcagcatggag
gacattatcacctacattgaggagatggaacatggcggaagagaggccctgccctatgag
attgacggcatggtcatcaaggtcaataatctggcagagcgggagcggctgggggacacc
tccaaatcaccccgctgggccattgcttacaagttctcgcccgagcagaccgtgaccact
gtgcgggacatcacggtgcaggtgggccgtaccggcgctctgacgcctgtggcggagctt
gagcctgtcctgctggcaggctccatgatctcccgggcgaccctccataacgaggactac
atcatcgacaaggatatccggattggcgacaaggttgtaatccagaaggccggggatgtt
atccccgaagtcgatcattccattccagaggagcgcaccggcgccgaggtcatttttacc
atgcccacccattgcccggtctgcggctccaaaacctaccgggtgcccggtgaggcagta
actaagtgcctgaacatggactgtccggcccaggtatttcgcaagattgttcatttcgcc
tccagagatgccatgaatatcgacggcatgggtccggcggtggtaagacagttgctggat
aacgaattgatccacaccattgtggatatctaccatgtttctaaccgtcgggaagacctg
accgggctcgaaaaaatgggcgaaaaatctgtggataacctcataaacgccatagaggat
tccaaaagcaggccgctctccaaggtggtttttgccctgggaattccgctggtaggagcc
aatggggccaaaatactggcctcccactttggcagcatggacgcccttatggaggcttcc
gaagaggagctgacagaaatttatgacatcggcggcaaaatggctgtggaaattgtggat
tttttcaagaccgatgcaaaccgacgtattgtggacggcctgcgggaggctggtgtcaac
atgacggaaaataccgccagggccactgcagaactcgcagggaaaacctttgtcctgacc
ggcacactgcccaccatgggacgccgtgaggccaaggagatcctggagagccacggcgcc
aaggtgtccggctcggtcagcaaaaaaactgattatgtgctggccggagaaaaccccggc
tccaaggccgagaaagccatgagcctggacgtgcccgttattgacgaggaagcctttaaa
aaaatggtcggcctggaataa
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