Enterobacter sp. FY-07: AKI40_0957
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Entry
AKI40_0957 CDS
T04405
Symbol
ygdE
Name
(GenBank) Ribosomal RNA large subunit methyltransferase M
KO
K06968
23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:
2.1.1.186
]
Organism
enf
Enterobacter sp. FY-07
Brite
KEGG Orthology (KO) [BR:
enf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
enf03009
]
AKI40_0957 (ygdE)
Enzymes [BR:
enf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.186 23S rRNA (cytidine2498-2'-O)-methyltransferase
AKI40_0957 (ygdE)
Ribosome biogenesis [BR:
enf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AKI40_0957 (ygdE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RLMM_N
RlmM_FDX
FtsJ
Spt5-NGN
Motif
Other DBs
NCBI-ProteinID:
AMO47380
LinkDB
All DBs
Position
987909..989009
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AA seq
366 aa
AA seq
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MNKVVLLCRPGFEKECAAEITDKAGRLEVFGFARVKENAGYVVFECYQESDADKLARELP
FNSLIFARQMFVVGELLKDLPPEDRITPIVGMLQGVVEKGGDLRVEVADTNESKELMKFC
RKFTVPLRSALREAGVLARSDSPKRPVVHVFFIAPGCCYTGYSYSFNNSPFYMGIPRLKF
PSDAPSRSTLKLEEAFHVFIPEDEWDERLANGMYAVDLGACPGGWTYQLVKRNMWVYSVD
NGPMAQSLMDTGQVTWLREDGFRYRPNRNNISWMVCDMVEKPAKVAALMAQWLTEGWCRE
TIFNLKLPMKKRYEEVSNNLAYIQAQLDEHGVAAQIQARQLYHDREEVTVHVRRMWAAVG
GRRDER
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagtggtgttgctgtgccgcccgggttttgagaaagagtgcgcagcagaaatt
accgataaggccgggcgtcttgaggtgttcggttttgcgcgcgtaaaagaaaacgcgggc
tatgttgtttttgaatgttatcaggaaagcgatgcagataagctggcgcgcgaactgccg
tttaatagcctgattttcgcccgtcagatgtttgtggtgggggaattactgaaggacttg
ccgccagaggatcgtattacgccgattgtcggtatgctgcaaggtgtggtggagaaaggc
ggcgatctgcgggttgaagtggctgacaccaacgaaagcaaagagctgatgaagttctgt
cgcaaattcaccgtgccgctgcgttcagcgttgcgtgaagcgggcgtgctggcgcgcagt
gattcgccaaaacgtccggtggtgcatgtcttttttattgcgcctggctgctgctatacc
gggtattcttactcctttaataactcaccgttctatatgggcatcccgcgtctgaaattt
ccatccgacgcgccgagccgctcaacgttaaagctggaagaggcgttccacgtctttatc
cctgaggatgagtgggacgagcgcctggccaatggaatgtatgctgtcgatcttggcgca
tgccctggcggttggacctatcagctggtaaaacgcaacatgtgggtttactcagtggat
aacggcccgatggcgcaaagtctgatggataccggtcaggtgacctggctgcgggaagat
ggcttccgctatcgccccaatcgcaacaacatctcatggatggtgtgcgatatggtggag
aaaccggcgaaagtcgctgcgctgatggcgcaatggttgactgaaggctggtgccgcgaa
accatttttaaccttaaactgccgatgaaaaaacgctacgaagaggtctccaacaacctg
gcgtatattcaggcgcagcttgatgaacacggtgtcgccgcgcagattcaggcgcgacag
ctgtaccacgatcgtgaagaagtgacggtacatgtacgccggatgtgggccgcggtcggc
gggcgacgcgacgagcgttag
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