Endozoicomonas sp. GU-1: O2T12_20845
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Entry
O2T12_20845 CDS
T08918
Name
(GenBank) hypothetical protein
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
eng
Endozoicomonas sp. GU-1
Pathway
eng03030
DNA replication
eng03410
Base excision repair
eng03420
Nucleotide excision repair
eng03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
O2T12_20845
03410 Base excision repair
O2T12_20845
03420 Nucleotide excision repair
O2T12_20845
03430 Mismatch repair
O2T12_20845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eng03032
]
O2T12_20845
03400 DNA repair and recombination proteins [BR:
eng03400
]
O2T12_20845
Enzymes [BR:
eng01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
O2T12_20845
DNA replication proteins [BR:
eng03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
O2T12_20845
DNA repair and recombination proteins [BR:
eng03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
O2T12_20845
NER (nucleotide excision repair)
GGR (global genome repair) factors
O2T12_20845
MMR (mismatch excision repair)
DNA ligase
O2T12_20845
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
O2T12_20845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
Nlig-Ia
HHH_2
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
WBA80738
LinkDB
All DBs
Position
4999388..5001097
Genome browser
AA seq
569 aa
AA seq
DB search
MKKTISLLWIIFLLPAWADDCPQWDQGEATEQISRLSDEVAYHDELYFNQNAPIISDGEY
DDLLARLKYWQACFPSIATEKSLTRTPHNKYTIHHQAPMGSLKKAQSADEVKRFLQRIAD
SGVLVQPKIDGVAVELVYKNRRLIQASTRGNGEAGVDILHHIRQMPLIPKTLGNDEKNQL
ILHGELFARLDIIAPSILKQYASARHLVAGQLNRSDPETEAVKAFDFFPWQWVNSPFNSG
LQSITALANMGFPLTLEHTHKTTSYPEIKQRLEHYATINKPVFLMDGIVIKANSKTFKKQ
LGWTGDTPAWAMAWKFPPATTTSKVDAIEFTIGRTGNITPVVHIKPVLFKNRTLSTLSLG
TVQNLEKKAIAVGDQISVKLKGSAIPVFGKVLFRPANRISPKLPDTSRYTPFTCLSMAPG
CEQQFVARLIWLTGKQGLDLAAISKPAIHQWGQTGTIQTLVDILQLTPHSLQSAGMHPKE
VQQYFESIRRPKSLEQQIRALSIPGIGKSNARELAGCITDLRGLLSRQISDQCPTVGSKR
MEDLQDYVNRKQVRELIEFLVEPGSQKTG
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacaatatcgctcctgtggataatctttcttctaccagcctgggcagatgac
tgccctcagtgggatcaaggagaagccactgagcagatcagcaggctatcggatgaagtg
gcttaccatgatgaactgtacttcaaccagaacgccccgattatcagcgatggtgaatac
gacgacttgcttgccaggctgaaatactggcaagcgtgcttcccttccatcgcaacagag
aaatcccttacccgaacgcctcacaataaatacacaattcaccatcaggctcccatgggc
agcttaaagaaagcgcagtctgccgacgaagtaaaacgctttttacagcgaatagctgac
agtggtgttttggtacagccgaagattgatggcgtggcggtggagctggtctataaaaac
agacggttaatccaggcttccacccggggaaatggcgaagctggagtcgatatcctccat
catatccggcagatgccattgatcccaaaaacactgggtaatgatgaaaaaaaccaactt
attcttcatggagagctatttgcacggcttgatataattgctccatcaattcttaagcaa
tatgccagtgcccggcacctggttgctggtcagctcaatcggtctgatccagaaacggaa
gccgtaaaagcttttgattttttcccatggcaatgggttaacagcccttttaatagcggt
ttacagtcaataaccgctttagcgaacatgggctttcctctgaccctggagcatacccac
aaaacaacatcctaccctgaaatcaaacagcgccttgagcactacgcaaccatcaacaaa
cccgtatttttaatggatggaattgtgattaaggccaacagcaaaactttcaaaaagcag
ctgggctggacaggtgatacaccagcctgggccatggcatggaagtttccacctgcaacc
accacatcaaaagtggatgcgattgaatttaccattgggcgaaccggcaatatcacaccc
gtggttcatattaagcccgtactgttcaaaaacagaaccctctcaaccctttcactgggc
actgttcagaatctggaaaagaaagcgattgccgtaggggatcaaatcagtgtcaagctc
aaggggagtgccataccggtctttggtaaggtgttgtttcgtccggcaaacaggataagc
ccgaaactcccggatacaagccgttatacgccctttacctgcctctctatggcaccgggt
tgtgaacaacagtttgttgctcgcctgatatggttaaccggtaagcaggggcttgatctt
gccgcgatcagcaagccagccattcatcaatggggtcaaacgggaaccatccagacactg
gtggatattctgcagctgacaccccattcactgcaatcggcagggatgcatccaaaggaa
gtccaacaatactttgaatccattcgacgaccaaaaagcctggagcaacagatccgtgcg
ctgagtattccaggcatcgggaaaagcaatgcccgcgagttggctgggtgtataacggat
ttacgaggattgttatcccggcagatttcagatcagtgcccaacggttggcagtaaacgg
atggaagatttacaggactatgtgaacaggaagcaagttagagagttgattgagtttctg
gttgagcctggtagtcagaaaaccgggtaa
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