Enterobacter sp. HK169: EnteroDNA1_01558
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Entry
EnteroDNA1_01558 CDS
T11374
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
enhk Enterobacter sp. HK169
Pathway
enhk03030
DNA replication
enhk03410
Base excision repair
enhk03420
Nucleotide excision repair
enhk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
enhk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EnteroDNA1_01558 (ligA)
03410 Base excision repair
EnteroDNA1_01558 (ligA)
03420 Nucleotide excision repair
EnteroDNA1_01558 (ligA)
03430 Mismatch repair
EnteroDNA1_01558 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
enhk03032
]
EnteroDNA1_01558 (ligA)
03400 DNA repair and recombination proteins [BR:
enhk03400
]
EnteroDNA1_01558 (ligA)
Enzymes [BR:
enhk01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
EnteroDNA1_01558 (ligA)
DNA replication proteins [BR:
enhk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EnteroDNA1_01558 (ligA)
DNA repair and recombination proteins [BR:
enhk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
EnteroDNA1_01558 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EnteroDNA1_01558 (ligA)
MMR (mismatch excision repair)
DNA ligase
EnteroDNA1_01558 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EnteroDNA1_01558 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
AOL12766
LinkDB
All DBs
Position
complement(1645290..1647233)
Genome browser
AA seq
647 aa
AA seq
DB search
MDAPEVPDAEYDRLMRELRELEAQHPELITPDSPTQRVGAEPLGAFSQVRHEVPMLSLDN
VFDEESFLAFNKRVQDRLKSSDSLTWCCELKLDGLAVSLLYENGVLVRAATRGDGTTGED
ITTNVRTIRAIPLKLQGENIPARLEVRGEVFLPQAGFEKINDEARRTGGKVFANPRNAAA
GSLRQLDPRITAKRPLTFFCYGVGILEGGELPDTHLGRLLQFKAWGLPVSNRVQLCDSPE
AVLAFYHKVEEDRPTLGFDIDGVVIKVNSLALQEQLGFVARAPRWAVAFKFPAQEQMTVV
RDVEFQVGRTGAITPVARLEPVQVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVI
PQVVNVVESERPADTREIVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFV
SRRAMDVDGMGDKIIDQLVEKEYVHTPADLFRLTAGKLTGLDRMGPKSAQNVVNALEAAK
ETTFARFLYALGIREVGEATAAGLAAYFGTLEALEKASIDELQKVPDVGIVVATHVFNFF
AEESNREVIGKLLEEGIRWPAPVVVNAEEIDSPFAGKTVVLTGSLSQLSRDDAKARLVAL
GAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIAVIDEAEMMRLLGE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgccggaagtcccggatgccgaatatgaccgcctgatgcgcgagctgcgcgaa
ttagaggcgcagcatccggagcttatcacgccggattcccccacccagcgcgtcggcgct
gagccgcttggcgctttcagccaggtgcgccatgaggtgccgatgctgtcgctggataac
gtatttgatgaagagagcttcctcgcgtttaacaagcgcgtgcaggatcgtctgaaaagc
agcgactccctcacctggtgctgcgagctcaagctggatggcctggcggtcagtcttctc
tatgaaaacggtgtgctggtgcgtgccgcaacgcgtggcgacggtacgacgggcgaagac
atcaccaccaacgtgcgtaccatccgcgcgatcccgctgaagctgcagggtgaaaacatt
cccgcgcgtctggaagtgcgcggcgaggtgttcctgccccaggcgggcttcgagaaaatt
aacgacgaggcgcgtcgcaccggcgggaaggtgtttgctaacccgcgtaatgcggcggca
ggctctctgcgccagcttgacccgcgtattaccgcgaagcgaccgcttactttcttctgc
tacggcgtcggtattctggagggcggcgagctgccggatacgcacctcggacgcctgctg
cagtttaaagcgtggggcctgccggtgagcaaccgcgttcagctctgcgactcgccggaa
gcggtgctggcgttctaccacaaggtggaagaggaccgtccgacgctcggttttgatatt
gatggcgtcgtcatcaaggtgaattctctggcgctgcaggagcagctaggctttgtggcg
cgcgcgccgcgctgggcggtggcgtttaagttccctgctcaggagcagatgaccgtcgtt
cgcgatgtggagttccaggttggccgtacgggggcgattaccccggtcgcccgtctggag
cccgtgcaggttgcgggcgtgctggtgagtaatgccacgttgcataacgccgatgaaatc
gaacgcctcggcctgcgcattggtgacaaagtggtgattcgccgcgcgggcgacgttatc
ccgcaggtggttaacgtcgtggagtcggaacgtcctgccgatacgcgcgagatcgtcttc
ccgacccactgcccggtgtgcggctccgacgttgagcgtgtggaaggtgaagcggtggcg
cgctgtactgggggcttaatctgtggtgcgcagcgtaaagaatcgctgaagcacttcgtc
tcccgtcgggcgatggatgtcgacggcatgggcgacaagattatcgatcagctggttgag
aaagagtatgtccatacgccagcggatctcttcaggctgacggcaggtaaactgaccggt
ctggatcgcatggggccaaagtcagcccagaatgtggttaacgcgctggaagccgccaaa
gagacgacctttgcccgcttcctgtacgcgctgggcattcgtgaagtgggtgaggcgacg
gcagcgggcctggcggcgtactttggtacgctggaggcgctggaaaaggcaagcatcgac
gagctgcagaaagtccctgacgttggcattgtggtcgccacgcacgtatttaacttcttc
gccgaagagagcaaccgtgaagttatcggcaagctgctggaagagggcatcaggtggccc
gcgccagtggtggttaacgccgaagagatcgacagtccgttcgccggtaaaacggtcgtc
ctgaccggcagcctgagccagctttcacgcgacgatgcgaaagcgcgcctggtggcgctg
ggggccaaagtggcgggcagcgtgtcgaagaaaaccgacctggtgatcgccggggaagcg
gcgggttcgaagctggcaaaagcccaggagctcggcattgcggttatcgatgaagcggaa
atgatgcgtctgttaggagagtaa
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