Ensifer sp. PDNC004: JVX98_08730
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Entry
JVX98_08730 CDS
T09472
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
enp
Ensifer sp. PDNC004
Pathway
enp00300
Lysine biosynthesis
enp00550
Peptidoglycan biosynthesis
enp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
enp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JVX98_08730
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JVX98_08730
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
enp01011
]
JVX98_08730
Enzymes [BR:
enp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
JVX98_08730
Peptidoglycan biosynthesis and degradation proteins [BR:
enp01011
]
Precursor biosynthesis
Amino acid ligase
JVX98_08730
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
NAGPA
Motif
Other DBs
NCBI-ProteinID:
QRY68351
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Position
175835..177298
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AA seq
487 aa
AA seq
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MKIKDLAGSNFPELSAQLSGAAADIDVAGLTADSRQVQPGDLFVAVSGSKANGSTYVADA
LKRGAVAVVTETGSDVDASAAPVLKLSEPRAFLARAAAAFYGRQPETMVAVTGTAGKTSV
ASFTRQIWAHSGLAAAMIGTTGVVAPGRNDYGSLTTPDPVSLHKLLAELADAGVTHAAME
ASSHGLDQSRLDGVRLAAAAFTNLGRDHMDYHPTVEHYMASKMRLFEALLPKGAPAVIFA
DDQWSDQAIAAARKAKLDVRTVGRKGDYISLKRVEHFRHKQSAEVHVGDDIFEIHIPLAG
DFQVANALVAAGLAMSTGISAKAAFSALEKLQGASGRLELVGQTRDGALAYVDYAHKPDA
LENVLASVRPFTTGRVVVVFGCGGDRDKGKRPIMGEIATRLADVTIVTDDNPRSEVPDAI
RAEIMAAAKGAIEIGDRATAIRTAVGMLKTGDTLIVAGKGHEEGQTIGSVTLPFSDHAEV
RKALGGL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaaagacctggcgggatcgaacttcccggaactttcggcgcaattgagcggc
gctgccgccgatattgacgttgccggactgacggcggatagccggcaggttcagccaggg
gatctcttcgtcgccgtttccggcagcaaggccaatggcagcacctacgtcgccgacgcc
ctgaagcgcggcgcggtcgccgtcgtcaccgaaacgggctctgacgtcgacgcctcggcg
gcgcccgtgctcaagctttccgaaccccgcgcctttctcgcccgcgctgccgctgccttc
tatggccgccagccggaaaccatggtcgccgtcaccgggaccgccggcaagacctcggtc
gcctcgtttacccgccagatctgggcgcattccggtcttgcagccgcgatgatcggcacg
accggcgtcgtcgcccccgggcgtaacgactacggttcgctgaccacgcccgatccggtg
tcgctgcacaagctgctcgccgaacttgccgatgcaggcgtcacccatgcggcgatggag
gcctccagccacggtctcgaccagagccggctcgacggcgtgcgccttgcggctgccgcc
ttcaccaatctcggccgcgaccacatggactaccacccgacggtcgagcactacatggcc
tccaagatgcggctgttcgaggcgctgttgccgaagggcgcgccggcggtgatctttgcc
gacgaccaatggtcggaccaggcgatcgcggctgcccgcaaggccaagctcgacgtgcgc
accgttggccgcaagggcgattacatctcgctaaagcgggtcgaacatttccgccacaag
cagtcggccgaagtgcatgtcggcgacgacatcttcgaaatccacattccgctcgccggc
gacttccaggtcgccaatgcgctcgttgcggcaggccttgccatgtccaccggcatcagc
gccaaggcggccttctccgcgcttgaaaagctgcagggtgcctccggtcgcctcgaactg
gtcggccagaccagggacggcgcgctcgcctatgtcgactacgcccacaagccggatgcg
ctcgaaaacgtgctcgcctcggtgcgcccgttcacgactggccgcgtcgtcgtggtcttc
ggctgcggcggtgaccgtgacaagggcaagcgcccgatcatgggcgaaatcgccacccgg
cttgccgacgtgacgatcgtcaccgacgacaatccgcgctcggaagtgccggacgcgatc
cgcgccgaaatcatggcggcggccaagggcgcgatcgaaatcggcgaccgcgccacggcg
atccgcacggcggtcggcatgctgaagaccggcgacacgctgatcgtcgccggcaagggg
cacgaggaggggcagacgatcggctccgtcacgctgcccttctcggatcatgcggaggtc
cgcaaggcattgggaggcttgtga
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