Ensifer sp. PDNC004: JVX98_21930
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Entry
JVX98_21930 CDS
T09472
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
enp
Ensifer sp. PDNC004
Pathway
enp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
enp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JVX98_21930 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enp03400
]
JVX98_21930 (nth)
Enzymes [BR:
enp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JVX98_21930 (nth)
DNA repair and recombination proteins [BR:
enp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JVX98_21930 (nth)
Prokaryotic type
JVX98_21930 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QRY67021
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All DBs
Position
complement(2797699..2798475)
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AA seq
258 aa
AA seq
DB search
MKNVKPKLPVRAAKPKPAAGRRAMPRVKSLYSQDELKEIFRRFSIQRPEPKGELEHVNPF
TLVVAVALSAQATDAGVNKATRALFAIADTPEKMLALGEEKVRDYIKTIGLFRNKAKNVI
ALSEKLIRDFGGEVPRTREELVTLPGVGRKTANVVLSMAFGQSTIAVDTHILRIANRICL
APGKTPDEVEDKLIRIIPDEYLYHAHHWLILHGRYCCKARKPECERCVIADLCKSPEKTC
DIPAPLVELPPQMISAAG
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgtgaagccgaaattgcctgttcgcgccgccaaaccaaagcctgcagccggt
cgtcgcgccatgccgcgggtgaagagcctctatagccaggacgagctcaaggagatcttc
cggcgcttctcgatccagcggccggagccgaagggcgagctcgagcatgtcaatcccttc
acgctggtcgtcgccgtggcgctctcggcgcaggcgaccgatgccggcgtcaacaaggcg
acgcgcgcgctctttgccatcgccgatacgccggaaaaaatgctggcgctcggcgaggag
aaggttcgggactacatcaagacgatcggactttttcgcaacaaggcaaagaacgtcatc
gcgctgagtgagaagctcatccgggatttcggcggcgaggtgccgcgcacgcgggaggaa
ctggtgacgctgccgggcgtcggtcgcaagaccgccaatgtcgtgctttccatggccttc
ggccagtcgacgatcgccgtcgacacccacatcctgcgcatcgccaacaggatctgtctg
gcgccgggcaagaccccggacgaggtggaagacaagctgatcaggatcatccccgacgag
tatctctaccacgctcaccactggctgatcttgcacgggcgctactgctgcaaggcgcgc
aagcccgaatgcgagcgctgcgtcatcgccgatctctgcaagtcaccggaaaagacctgc
gatatcccggcgccgctggtcgagctgccgccgcagatgatctcggctgctggttga
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