KEGG   Enterobacter sp. R4-368: H650_14570
Entry
H650_14570        CDS       T02700                                 
Name
(GenBank) DNA ligase
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
enr  Enterobacter sp. R4-368
Pathway
enr03030  DNA replication
enr03410  Base excision repair
enr03420  Nucleotide excision repair
enr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:enr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    H650_14570
   03410 Base excision repair
    H650_14570
   03420 Nucleotide excision repair
    H650_14570
   03430 Mismatch repair
    H650_14570
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:enr03032]
    H650_14570
   03400 DNA repair and recombination proteins [BR:enr03400]
    H650_14570
Enzymes [BR:enr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     H650_14570
DNA replication proteins [BR:enr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     H650_14570
DNA repair and recombination proteins [BR:enr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     H650_14570
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     H650_14570
   MMR (mismatch excision repair)
    DNA ligase
     H650_14570
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      H650_14570
SSDB
Motif
Pfam: DNA_ligase_OB DNA_ligase_aden RNA_ligase DUF3701 Nlig-Ia
Other DBs
NCBI-ProteinID: AGN86311
LinkDB
Position
complement(2887976..2889655)
AA seq 559 aa
MWKRTGFAVCLLLWSLSSQAVCPVWSPSRAQDEVNRLQQQLARWNEHYWKQGASEVSDTV
YDQLSARLAAWQRCFALEPANSAPVLPGGSVKHPVAHTGVQKLAGKQALQRWMAGKTDLW
AQPKVDGVAVTLVYRNGQLTQAISRGDGLAGEDWTAKIRAIPSIPEKVSGALANSVLQGE
LFLRTENHIQKQAGGLNARAKVAGAMMRRDESAILNDLAFFVWAWPDGPATLAQKLVELS
KAGFSDEMQYSVPVSTVEDVENLRSRWFTSELPFVTDGVVVRSGTEPAGNTWLPGQGNWV
VAWKYEPPEEIATVKDIQFAIGRTGKISVVALLEPVQLDDKRVQRVNLGSVRRWQELDVA
PGDQIAVSLAGQGIPRIDSVAWRSLVRDKPVPPAPRFTALTCFYASAECQEQFIARLVWL
SSAKALGIEGVGESGWRGLNQAHHFEHLFSWLALTKEQLQSTPGISPERGLQLWHRFSLV
REKPFIRWLIALGTPLPQPALKVTGDTTWQQMRTRNENEWQHFPAIGAEKARQIVAFMHA
PEIEKLSVWLREQGVKAFQ
NT seq 1680 nt   +upstreamnt  +downstreamnt
atgtggaaaagaaccggattcgcggtgtgtctgttgctatggagcctgtccagccaggcg
gtttgccctgtctggtcgccatcaagagcgcaagacgaggttaaccgtcttcaacaacag
cttgcccggtggaatgagcactactggaagcagggagcaagcgaggtaagtgacacggtt
tacgaccagctcagcgcacggctggcggcgtggcaacgctgttttgcgcttgaaccagcc
aattcagcacctgtcttacccggcggaagtgtgaaacatcctgtcgcgcacacaggggta
caaaaactggcgggtaagcaagcgctacagcgctggatggcaggaaaaaccgatctttgg
gcgcaaccaaaagtggatggcgtcgcggtgacgttagtctatcgcaatggtcaactgacg
caggcaatcagtcgcggcgatggtctggctggtgaggactggacggcaaaaatacgcgct
atcccatcgatccctgaaaaggtgagtggtgcgctggcgaacagcgtattgcagggtgaa
ctgtttttacgcacggaaaaccatattcagaaacaggccggtgggcttaacgcccgtgca
aaagtagccggtgcgatgatgcgacgcgatgagtccgccattctcaatgatttggcgttt
ttcgtctgggcatggccagacggccccgcaacactggcgcaaaagctggtggaactcagc
aaagccgggtttagtgacgaaatgcaatacagcgtgccagtgagcacggtagaagacgtc
gaaaacctgcgcagccgttggtttacctctgaattgccttttgtcaccgatggtgtggtg
gtgcgctcaggaaccgaacccgcgggaaatacgtggctaccggggcagggtaattgggtg
gtggcatggaaatatgaaccacccgaggaaattgcaaccgtaaaagatattcagtttgcc
attggacgcaccggtaaaatctccgtggtggctctgctggaaccggtgcaacttgatgac
aaacgcgtccagcgggtcaatttgggttctgtccggcgctggcaagaactggatgttgcg
cctggcgatcaaatcgctgtcagccttgcaggacaagggatcccgcgcatcgacagtgtg
gcgtggcgttcacttgttcgcgataaacctgtcccaccagcgccacgttttaccgcgttg
acctgcttttatgcctctgcagaatgtcaggagcaattcattgctcgcctggtgtggttg
agttcggcaaaagcgctggggattgaaggggttggcgaaagtggctggcgggggttgaat
caggcgcatcactttgaacatctcttttcatggctggcgctgacaaaagagcaattacag
tcgacacccggcatttcgccggaacgcggtttacagctctggcatcgcttttcgctggta
cgagaaaaaccgtttattcgctggcttattgcacttggaacaccgttaccgcagcctgct
ctgaaagtcactggcgacacaacgtggcagcaaatgcgcacgcgtaacgaaaacgagtgg
caacattttccggcaataggtgctgaaaaagcccggcagattgttgcctttatgcatgct
cccgaaattgaaaaactttcggtttggttgcgtgaacaaggagtaaaggcgtttcagtga

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