Enterobacter sp. R4-368: H650_14570
Help
Entry
H650_14570 CDS
T02700
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
enr
Enterobacter sp. R4-368
Pathway
enr03030
DNA replication
enr03410
Base excision repair
enr03420
Nucleotide excision repair
enr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
enr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H650_14570
03410 Base excision repair
H650_14570
03420 Nucleotide excision repair
H650_14570
03430 Mismatch repair
H650_14570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
enr03032
]
H650_14570
03400 DNA repair and recombination proteins [BR:
enr03400
]
H650_14570
Enzymes [BR:
enr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
H650_14570
DNA replication proteins [BR:
enr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
H650_14570
DNA repair and recombination proteins [BR:
enr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
H650_14570
NER (nucleotide excision repair)
GGR (global genome repair) factors
H650_14570
MMR (mismatch excision repair)
DNA ligase
H650_14570
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
H650_14570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_OB
DNA_ligase_aden
RNA_ligase
DUF3701
Nlig-Ia
Motif
Other DBs
NCBI-ProteinID:
AGN86311
LinkDB
All DBs
Position
complement(2887976..2889655)
Genome browser
AA seq
559 aa
AA seq
DB search
MWKRTGFAVCLLLWSLSSQAVCPVWSPSRAQDEVNRLQQQLARWNEHYWKQGASEVSDTV
YDQLSARLAAWQRCFALEPANSAPVLPGGSVKHPVAHTGVQKLAGKQALQRWMAGKTDLW
AQPKVDGVAVTLVYRNGQLTQAISRGDGLAGEDWTAKIRAIPSIPEKVSGALANSVLQGE
LFLRTENHIQKQAGGLNARAKVAGAMMRRDESAILNDLAFFVWAWPDGPATLAQKLVELS
KAGFSDEMQYSVPVSTVEDVENLRSRWFTSELPFVTDGVVVRSGTEPAGNTWLPGQGNWV
VAWKYEPPEEIATVKDIQFAIGRTGKISVVALLEPVQLDDKRVQRVNLGSVRRWQELDVA
PGDQIAVSLAGQGIPRIDSVAWRSLVRDKPVPPAPRFTALTCFYASAECQEQFIARLVWL
SSAKALGIEGVGESGWRGLNQAHHFEHLFSWLALTKEQLQSTPGISPERGLQLWHRFSLV
REKPFIRWLIALGTPLPQPALKVTGDTTWQQMRTRNENEWQHFPAIGAEKARQIVAFMHA
PEIEKLSVWLREQGVKAFQ
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaaagaaccggattcgcggtgtgtctgttgctatggagcctgtccagccaggcg
gtttgccctgtctggtcgccatcaagagcgcaagacgaggttaaccgtcttcaacaacag
cttgcccggtggaatgagcactactggaagcagggagcaagcgaggtaagtgacacggtt
tacgaccagctcagcgcacggctggcggcgtggcaacgctgttttgcgcttgaaccagcc
aattcagcacctgtcttacccggcggaagtgtgaaacatcctgtcgcgcacacaggggta
caaaaactggcgggtaagcaagcgctacagcgctggatggcaggaaaaaccgatctttgg
gcgcaaccaaaagtggatggcgtcgcggtgacgttagtctatcgcaatggtcaactgacg
caggcaatcagtcgcggcgatggtctggctggtgaggactggacggcaaaaatacgcgct
atcccatcgatccctgaaaaggtgagtggtgcgctggcgaacagcgtattgcagggtgaa
ctgtttttacgcacggaaaaccatattcagaaacaggccggtgggcttaacgcccgtgca
aaagtagccggtgcgatgatgcgacgcgatgagtccgccattctcaatgatttggcgttt
ttcgtctgggcatggccagacggccccgcaacactggcgcaaaagctggtggaactcagc
aaagccgggtttagtgacgaaatgcaatacagcgtgccagtgagcacggtagaagacgtc
gaaaacctgcgcagccgttggtttacctctgaattgccttttgtcaccgatggtgtggtg
gtgcgctcaggaaccgaacccgcgggaaatacgtggctaccggggcagggtaattgggtg
gtggcatggaaatatgaaccacccgaggaaattgcaaccgtaaaagatattcagtttgcc
attggacgcaccggtaaaatctccgtggtggctctgctggaaccggtgcaacttgatgac
aaacgcgtccagcgggtcaatttgggttctgtccggcgctggcaagaactggatgttgcg
cctggcgatcaaatcgctgtcagccttgcaggacaagggatcccgcgcatcgacagtgtg
gcgtggcgttcacttgttcgcgataaacctgtcccaccagcgccacgttttaccgcgttg
acctgcttttatgcctctgcagaatgtcaggagcaattcattgctcgcctggtgtggttg
agttcggcaaaagcgctggggattgaaggggttggcgaaagtggctggcgggggttgaat
caggcgcatcactttgaacatctcttttcatggctggcgctgacaaaagagcaattacag
tcgacacccggcatttcgccggaacgcggtttacagctctggcatcgcttttcgctggta
cgagaaaaaccgtttattcgctggcttattgcacttggaacaccgttaccgcagcctgct
ctgaaagtcactggcgacacaacgtggcagcaaatgcgcacgcgtaacgaaaacgagtgg
caacattttccggcaataggtgctgaaaaagcccggcagattgttgcctttatgcatgct
cccgaaattgaaaaactttcggtttggttgcgtgaacaaggagtaaaggcgtttcagtga
DBGET
integrated database retrieval system