Enterobacter sp. 638: Ent638_2939
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Entry
Ent638_2939 CDS
T00507
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
ent
Enterobacter sp. 638
Pathway
ent03030
DNA replication
ent03410
Base excision repair
ent03420
Nucleotide excision repair
ent03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ent00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ent638_2939
03410 Base excision repair
Ent638_2939
03420 Nucleotide excision repair
Ent638_2939
03430 Mismatch repair
Ent638_2939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ent03032
]
Ent638_2939
03400 DNA repair and recombination proteins [BR:
ent03400
]
Ent638_2939
Enzymes [BR:
ent01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Ent638_2939
DNA replication proteins [BR:
ent03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Ent638_2939
DNA repair and recombination proteins [BR:
ent03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Ent638_2939
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ent638_2939
MMR (mismatch excision repair)
DNA ligase
Ent638_2939
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Ent638_2939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
HHH
5_3_exonuc
DZR_2
DUF2229
Motif
Other DBs
NCBI-ProteinID:
ABP61603
UniProt:
A4WD23
LinkDB
All DBs
Position
complement(3189895..3191910)
Genome browser
AA seq
671 aa
AA seq
DB search
MDSIEQQLTQLRTTLRHHEYLYHVMDAPEVPDAEYDRLMRELRELEAQHPELVTPDSPTQ
RVGAAPLASFSQVRHEVPMLSLDNVFDEESFLAFNKRVQDRLKSADTLTWCCELKLDGLA
VSILYENGLLVRAATRGDGTTGEDITANVRTIRAIPLTLRGDNIPARLEVRGEVFLPQKG
FEKINDEARRTGGKIFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGILEGGVLPDTHL
GRLLQFKEWGLPVSNRVQLCDSPEAVLAFYHKVEEDRPSLGFDIDGVVIKVNSLALQEQL
GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVQVAGVLVSNATLHN
ADEIARLGLRIGDKVVIRRAGDVIPQVVNVVESERPDDTREIVFPAHCPVCGSDVERVEG
EVVTRCTGGLICGAQRKEALKHFVSRRALDVDGMGDKIIDQLVEKEYVHTPADLFRLSAG
KLTGLDRMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAHFGTLEQLEK
ATIDDLQKVPDVGIVVATHVFNFFAEESNRDVIGKLLEEGIHWPAPVVINVEEIDSPFAG
KTVVLTGSLSQMSRDDAKARLVAIGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIDVI
DEAEMLRLFGE
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggactcaatcgaacaacaactgacacagctaagaaccacacttcgccatcatgaatat
ctttatcatgtgatggacgccccggaagtcccggatgcggaatatgaccgcctgatgcgt
gagttgcgcgagctggaagcgcaacaccccgaattagttacgcctgattccccgactcaa
cgcgtgggcgctgcgccgctggcctccttcagtcaggtgcgtcacgaagttcctatgctt
tcgctggacaacgtgttcgatgaagagagttttcttgcgttcaacaagcgcgtccaggac
cggctgaaaagcgcggataccctgacctggtgctgtgagctcaagcttgacgggttggct
gtcagtattctgtatgaaaatggtctgctggtgcgcgcagctacgcgcggcgatggcaca
acgggcgaagatatcaccgccaacgtacggaccattcgcgccattccattaacgctgcgt
ggcgacaacattcccgcgcgtcttgaagtgcgtggtgaggttttcctcccgcagaagggc
tttgagaagatcaacgacgaagcgcgtcgcaccggcgggaaaattttcgctaacccgcgt
aacgccgcagcaggttcattgcgtcagctggatccacgcattacagcgaagcgaccgctc
actttcttctgctacggcgtcggtatcctggaggggggcgtattgcctgatacccatctg
gggcgtttgctgcagtttaaagagtggggcctgccggtcagcaaccgcgtacagctgtgc
gactctcccgaagccgtgctggcgttttatcacaaagttgaagaagaccgcccgtcgctg
gggtttgatatcgacggcgtggtgatcaaagtgaattccttggcgcttcaggaacagttg
ggctttgtcgcccgcgcgccgcgctgggctgtcgcgtttaaattccctgcgcaagagcag
atgacctttgtgcgcgacgtggagttccaggtaggacgcactggcgctatcacaccggtt
gcgcgccttgagccggtgcaggtcgcgggcgtgctggtcagcaacgcgactttgcataat
gccgacgaaattgcgcgcctgggcctgcgtattggcgataaagtcgttatccgtcgtgcc
ggtgatgtcattccgcaagtcgttaacgtcgtggagtctgagcgccctgacgatacacgt
gaaattgttttccccgcccattgccccgtctgtggatccgatgtcgaacgtgtggagggc
gaagtggtaacgcgctgcacgggcggtttgatttgtggcgctcagcgcaaagaggcactc
aagcactttgtttcgcgccgagcgttagatgtggacgggatgggcgataaaatcatcgac
caactggttgagaaagagtatgtccacacgcctgccgatctgttccgcctgagcgctggc
aagctgaccggactcgaccgaatgggaccgaagtccgcgcaaaacgtcgtcaacgcgcta
gagaaggctaaagaaacgacgtttgcccgcttcctgtatgcgctgggtattcgcgaagtg
ggtgaggcaacggcagcaggcctggcggctcatttcggtacgcttgagcaacttgaaaag
gcgacgattgacgacctgcaaaaagtgccagacgtcggaattgttgtcgccactcacgtc
tttaacttctttgctgaagagagtaaccgcgacgtgatcggcaaactgctggaagagggc
attcactggcccgcaccggtggttattaatgtcgaagagatcgacagtccatttgccggt
aaaacggtggtattgaccggcagcctgagccagatgtcgcgagacgatgctaaagcgcgt
ctggtcgcaattggtgcaaaagtggcgggcagcgtgtcgaagaaaaccgatctggtgatt
gccggagaagcggccggttcaaaactggcgaaggcccaggaactgggtattgacgtgatt
gacgaagcggaaatgctgcgtctgtttggggaatag
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