Eucyclogobius newberryi (tidewater goby): 140351683
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Entry
140351683 CDS
T10929
Symbol
slit1a
Name
(RefSeq) slit homolog 1a isoform X1
KO
K06838
slit 1
Organism
eny Eucyclogobius newberryi (tidewater goby)
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
eny00536
]
140351683 (slit1a)
Glycosaminoglycan binding proteins [BR:
eny00536
]
Heparan sulfate / Heparin
Axon guidance molecules
140351683 (slit1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
LRRNT
hEGF
LRR_1
LRRCT
LRR_9
EGF_TEN
LRR_14
LRR_EndoS
EGF_DL_JAG
EGF_Teneurin
EGF_3
JAG1-like_EGF2
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
140351683
NCBI-ProteinID:
XP_072293730
LinkDB
All DBs
Position
Unknown
AA seq
1531 aa
AA seq
DB search
MQVKGYGTGVHGAPLWMCLCLLLLVLLPDKARACPALCTCSGTTVDCHGLGLKTMPRNIP
RNTERLELNGNNLTRITKTDFAGLKYLRVLQLMENQIIVVERGAFDDMKELERLRLNRNQ
LQQLPELLFQKNPALSRLDLSENLIQSIPRKAFRGATDIKNLQLDKNHIACIEDGAFRAL
RGLEVLTLNNNNISSIPVSSFNHMPKLRTFRLHSNNLNCDCHLSWLAQWLRQRPTIGLFT
QCTGPAELRGLNVAEVQKHEFTCSGHQESSSPQPCSTGGGSCPAMCTCSNNIVDCRGKGL
TAIPANLPETMAEIRLEQNGIKSIPPGAFSPYKKLRRIDLSNNQISEIAPDAFQGLRSLN
SLVLYGNKITDLPKGVFDGLYALQLLLLNANKIHCVRAITFQDLQNLSLLSLYDNKIQSL
AKGTFTSLRAIQTLHLAQNPFICDCNLKWLADYLRTNPIETSGARCASPRRLANKRIGQI
KSKKFRCSAKEQYTIPGAEDSRLNNACNSDPVCPPKCRCESNVVDCSNLKLTKIPEHIPA
STAELRLNNNEITILEATEVFKSLSQLKKINLSNNKITEIEDGAFEGASSVNELHLTANQ
IDSVRSGMFQGLEGLRMLMLRNNKISCVHNDSFTGLHNVRLLSLYDNQLTTITPGAFDTL
QTLSTLNLLANSFNCDCHLAWLGDWLRNRKIVTGNPRCQRPAFLKEIPLQDVALPDFRCE
EGQEELSCVPRPQCPSECTCVEAVVRCSNKHLHTLPKGIPRNVTELYLDGNQFSVVPKEL
STFKNLQLVDLSNNKINSLTNSSFANMSQLTTLILSYNSLRCIPRMAFSGLHSLRLLSLH
GNDISELPEGIFNDVGSLSHLAIGANPLYCDCRLRWLSDWVKTGYKEPGIARCVGPQGME
GKLLLTTPAKRFECNDEVDTAVLAKCNPCISNPCLNHGICHIDIADIYTCSCPPSFKGKN
CETALNACVSNPCANGGTCKVDEDVEGKYSCMCPVGFEGPRCQTNTDDCDDNDCESGATC
IDGVNNYTCLCPPYYTGEMCEEMEDVCAPGRSPCQHQSTCLITSNGPKCVCSPGYVGDDC
SVDYNDCEEHRCQNGAQCVDEHNGYSCSCLEGYSGQLCEIAPSLVSLCELADCQNDAPCV
EQGGHALCQCPPEFGGPRCEKLVSVNFVDRDSYLLLSDLQNWPQANITLQVSTAEDNGIL
LYNGDNDHIAVELFQGHVKVSYDPGSQPGHAIYSTETINDGQFHTVELVTFDQMVNLSID
GGLPTTMDSFGAARPLNGEAPLYVGGMPVDVHSGAFRLWQIQNGTSFHGCIQNLYINNEL
QDFTKTQMKPGVVPGCEPCKKIYCVHGICQPDGFHGPVCHCQLGWSGPHCDQLSTTPCQG
SKCVHGKCIPLDSESYRCECDEGYRGALCNQQGELFNPCRHLTCKHGRCQISDTGDAYCH
CESGFTGELCDAESACRGEPVRDFYQVQRGYTICQTTRMVSWVECSGVCDSGSCCASQRM
KRRKYTFECSDGTSFTEEVEKTIKCGCVGCM
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgaaaggttacgggacgggggtacacggcgctcccctctggatgtgcctctgc
cttctgctcctggtgctgctcccggacaaagccagagcctgtcctgccctctgtacctgc
agcgggaccacggtggactgtcacggcctcggactgaagaccatgccgcggaatatccct
cgcaacactgaacgcctggagctgaatgggaataatctcactcgcatcaccaagacggac
tttgccgggctgaagtacctcagagttctgcagctgatggagaatcagattattgtggta
gaacgaggggcttttgatgatatgaaagaactggaaagactgcggctgaaccgtaatcaa
ctgcagcagcttcccgagttactgtttcagaagaacccggccctgtctcgactagatcta
agtgagaacttgatccagtcgatccccagaaaagccttcagaggagccacagacattaaa
aaccttcagctggataaaaaccacatcgcctgcattgaagatggagcatttcgggcactg
agaggcttggaagttctaacactaaacaacaataacatcagcagcatccctgtctccagc
tttaaccacatgcctaaactaagaaccttccgtctccactccaacaatctcaactgtgac
tgtcatctatcctggttggcccagtggctcagacagagacccaccattggactgttcacc
cagtgcactggacctgcagagctcagaggcctgaatgtagccgaagtacaaaagcacgag
ttcacatgctcaggtcaccaggagtcttcgagccctcagccgtgcagcaccgggggagga
tcctgtcccgcaatgtgcacatgcagcaacaacatagtggactgccgagggaaaggttta
actgccattcctgcaaacctgccggagactatggccgaaatacgtctggagcagaatggg
atcaagtctattcctcctggagccttctctccatacaagaagctgcgtaggatagacttg
agcaacaaccagatttcagagattgctcctgatgccttccagggcctgcgctctctcaac
tctcttgtgctgtatggaaataaaatcacggacctgcccaagggggtgtttgacggcctg
tatgcccttcaactgctgttgctgaatgccaataagattcactgtgtacgtgccatcacc
ttccaggacctgcagaatctctcgctgctgtccttgtatgacaacaagattcaaagcctt
gccaagggcaccttcacttctttaagagccatacaaacactccacctggcccagaaccca
tttatttgtgactgtaacctcaagtggcttgccgactaccttcgtacaaacccaattgag
acgagtggtgcccgctgtgccagccctcgccgcctcgctaacaaacgcattggacaaatt
aagagcaagaaattccgctgctcagccaaagagcagtacacaatccctggtgcagaggac
agccgtctgaacaacgcctgtaacagtgatccagtttgtccaccaaagtgtcgctgtgag
tccaatgtagttgactgctccaacctgaagctcaccaagatccccgagcacatccctgct
tcaactgctgaacttcgactcaacaataatgagatcacaattttggaggcaactgaagtg
tttaaaagcctttcccagcttaagaaaatcaacctcagcaacaacaaaattactgagatt
gaagatggtgcttttgaaggtgcgtcttctgtgaatgagcttcacctcacagccaatcag
attgactctgttcgtagtgggatgttccagggtctggagggtctgcgcatgctaatgctg
aggaacaataagatcagctgtgtgcacaatgacagtttcaccggattgcacaatgtacgt
ctgctgtctttgtacgacaaccagctcaccaccatcactcctggtgccttcgacacgctg
cagacactgtcaacactcaaccttttggctaactcattcaactgtgactgccacctggcc
tggcttggcgactggctccgaaacaggaaaatagtgactggaaacccacgctgccagcgt
ccagcgtttctcaaagagattcctctgcaggatgtggctctgcctgatttccgctgtgaa
gagggccaagaggagttgagctgcgtgcccaggccgcagtgtcccagtgagtgcacttgt
gtggaggcagttgtccgctgcagtaacaaacacctccacactcttcccaaaggcatccct
agaaatgtgacagaactctatttggatggaaaccagtttagtgttgtgccaaaggagctg
tctacattcaagaatcttcagctggttgacctgagcaacaacaagatcaactccctgacc
aactcgtcctttgccaacatgagccagctcaccacactaatcctgagttacaattcccta
cgctgtatccccagaatggcattcagtgggctgcactccctgcggctgctgtctcttcat
ggcaatgacatctctgaacttcctgaaggtatcttcaatgatgtgggttccctttcccac
ttggcaattggtgcaaacccactttactgtgactgtcggctgcgatggctgtctgactgg
gtaaagactggctacaaagagcctggaattgcccgctgtgttggtccccagggcatggag
ggcaaactgctgctgactacacctgccaaaaggtttgaatgcaatgatgaggtggacact
gcggtgctggccaagtgcaacccatgtatttctaatccatgtcttaatcatggcatctgc
cacatcgacatagcagacatctacacttgcagctgtcctccaagcttcaaggggaagaac
tgtgaaacggctctgaatgcctgtgtcagtaacccctgtgccaacggaggaacctgtaaa
gtagacgaggatgtagagggaaagtacagctgtatgtgtccagtgggctttgagggccca
cggtgccaaaccaacactgacgactgtgacgacaatgactgtgaaagtggagcaacatgc
atcgatggagtcaacaactacacttgcctttgcccaccctactacacaggagagatgtgt
gaagaaatggaggatgtgtgtgccccaggacgaagcccctgccagcaccagtctacctgc
ctcatcacatctaatgggcccaagtgtgtgtgttctcctgggtatgttggtgacgactgt
agcgtagactataatgactgtgaggagcatcgctgtcagaatggggctcagtgtgtggat
gaacacaatggatactcgtgttcttgtttggagggatacagtggtcaactgtgtgagatc
gccccatccttagtgtctctgtgcgagctggcagactgccaaaatgatgcgccgtgtgtg
gagcagggcggccatgccctttgccaatgcccacctgagtttgggggaccacgctgtgaa
aagcttgtcagtgttaactttgtggaccgagattcatacttgctgctgtctgacctacag
aactggcctcaagccaacatcacccttcaggtgtcaacggctgaggataatgggatcctg
ctttataatggagacaatgatcatattgctgtggagctctttcaggggcatgtgaaagtg
agctatgacccaggcagtcagcctggacatgccatctacagcactgagaccatcaacgat
ggccaattccacacagtagagctagtgacctttgaccagatggtgaacctgtccattgat
ggaggtctcccaactacaatggacagctttggggcggcgcggcccctcaacggggaggct
ccactttatgtggggggtatgcctgtggatgttcattctggggctttcagactgtggcaa
attcagaatggcaccagtttccatggttgtatccagaacctgtacatcaacaatgagctc
caggacttcaccaaaactcagatgaagcctggcgtggtgccaggctgtgagccctgtaaa
aagatctactgtgtgcacggaatctgtcagccggacggcttccatgggccggtgtgtcac
tgccagctgggctggagtggaccacactgtgaccagctttccaccaccccctgccagggc
agcaagtgtgtccatggaaagtgtatccccctggacagtgaatcgtaccgttgcgagtgt
gacgaggggtaccgtggtgcactctgtaaccaacagggagagctctttaatccatgtcgc
cacttgacctgtaagcatggtcgctgccaaatttcagacacaggggatgcctactgccat
tgtgaaagcggcttcacaggggagctctgcgatgcagagtccgcgtgcagaggggagcct
gtgcgggacttctaccaggtgcagcgaggttataccatctgtcagaccacccgcatggtg
tcctgggtcgagtgctccggggtgtgtgactctgggtcctgctgcgccagtcagagaatg
aagcgccggaaatacacgtttgaatgcagtgatggtacttcgttcactgaggaagtagaa
aagaccattaagtgtggctgtgtgggctgtatgtag
DBGET
integrated database retrieval system
