Eucyclogobius newberryi (tidewater goby): 140358209
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Entry
140358209 CDS
T10929
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140358209 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eny03041
]
140358209 (eftud2)
Spliceosome [BR:
eny03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
140358209 (eftud2)
Complex C
U5 SnRNP specific factors
140358209 (eftud2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
MMR_HSR1
Ras
Motif
Other DBs
NCBI-GeneID:
140358209
NCBI-ProteinID:
XP_072298999
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MEADLYDEFGNYIGPELDSDDDDDDLDAEDRDMDERDDDEDDEPADADDEVVPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKHRKFTLMEQELPATVYDMEFLA
DLMDSPELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDLDLRYTDILFTEQERGVG
IKSTPVTMVLPDSRGKSYLFNIMDTPGHVNFSDEVTSSIRLSDGVVLFIDAAEGVMLNTE
RLIKHAVQERMAITICINKVDRLILELKLPPTDAYYKLRHIVDEVNGMLSTYSTDENVVV
SPLLGNVCFASSQYSICFTLGSFAKIYSDTHGDISYTEFSQRLWGDIYFNPKTRKFTKKA
PTSNSQRSFVEFVLEPLYKILSQVVGDVDTSLPLVLDELGIHLSKEELKLNIRPLLRLVC
NRFFGEFTGLVDMCVHHIPSPQDGAKTKIEHSYTGGLNSDLGETMAECDPDGPLMCHTTK
MYSTEDGVQFHAFGRVLSGTMQAGQPVKVLGENYTLDDEEDSQVCTVGRLWISVARYQIE
VNRVPAGNWVLIEGCDQSIVKTSTITEPRGNEDAQIFRPLKFNTASVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DEPIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFALSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgatctttacgatgagtttggaaactacatcgggccggagctggactcggac
gacgatgacgatgatctggacgcagaggacagggacatggacgagagggacgacgacgaa
gacgacgagcccgctgacgccgatgatgaagtcgtcccggggatggaggtggttttacac
gaggacaagaagtattaccccacggcagaagaggtgtatggtcccgaggtggagaccatc
gtccaagaggaagacacacaacctctcacagagcccatcataaaacctgtaaaacacagg
aagttcacgttgatggagcaggagttgccggccacggtttatgacatggaatttctcgcc
gatctcatggacagtccagagctgatacgtaacgttaccttgtgtggtcacctccatcac
ggcaaaacttgttttgtcgattgcctcattgagcaaacgcatccagaaatcagaaagcga
gacgatttagatctccgatacacagacatactcttcacagaacaagaaagaggagttggc
atcaaaagtactcccgtcaccatggtgctgccggactccaggggcaaatcctacctcttc
aacatcatggacacgccgggccacgtgaacttctccgacgaggtcacgtccagcatccgg
ctctccgacggcgtcgtcctgttcatcgacgccgcagagggagtgatgttgaacacggag
cgcctcatcaaacacgcggtgcaggagcgaatggccatcacaatctgcatcaacaaagtg
gaccggctcatcctggagctcaaactgccccccacagacgcctactacaagctcaggcac
attgtggatgaggtcaacggcatgctcagcacatattccacggacgagaacgtggtggtt
tccccgctcctgggaaacgtgtgcttcgccagctctcagtacagcatctgcttcaccctc
ggctccttcgcaaagatctactcggacactcacggcgacatcagctacacagaattctcc
cagagactttggggagacatttatttcaacccaaaaacccgcaagttcacaaagaaagcg
ccgaccagtaactctcagcgcagctttgtggagtttgttctggagccgctgtacaagata
ctctcccaggtggttggagatgtggacacgtctctccctctggttttggacgaactgggg
atccatttgtccaaagaagagctcaagttgaacatcagacctttgctgagactggtctgt
aaccggttcttcggagagttcacaggcctggtggacatgtgtgtgcatcacatcccttca
ccacaagatggcgccaagaccaagatagagcactcgtacactggaggcttgaactctgac
ctgggggagaccatggcagagtgtgaccctgatggccccctgatgtgccacaccacaaag
atgtacagcactgaggatggggtccagttccacgcgtttggccgggtcttgagcgggacg
atgcaggcgggacagccagtcaaagtgttgggggagaactacactctggacgacgaggag
gactcccaggtctgcaccgtgggccgcctctggatctccgtcgccagataccaaatcgaa
gtgaaccgcgtacctgctggaaactgggtcctcatcgaaggctgcgaccagtccatcgtg
aagacctccaccatcacagagccccggggcaacgaagacgcccagatcttcaggcccctc
aagttcaacacggcgtcggtgataaagatcgcagtggagcccgttaatccgtccgagctg
ccgaaaatgctggacgggctgaggaaagtcaacaagagctacccgtcgctcaccaccaaa
gtggaggagtccggcgagcacgtgatcttgggaacaggagaactctacttggactgcgtg
atgcacgacctcaggaagatgtactcggagatcgacatcaaagtggccgatcccgtcgtc
acgttctgcgagaccgtggtggaaacctcctcgctcaagtgcttcgccgaaacgccaaac
aaaaagaacaagatcacgatgattgcagagcctctggagaagggcttggccgaggacatc
gagaacgaggtggtgcagatcacgtggaacaggaagaagctgggcgagttcttccagacc
aagtacgactgggatctgctggctgccaggtccatctgggcttttggccccgacaccacg
gggcccaacatcctggtggacgacacgctgccctctgaggtggacaaggcgctgctgggc
tcggtcaaagacagcatcgtccagggtttccagtggggcacgcgcgaggggcccctgtgc
gacgaacccatcagaaatgtcaagtttaagatcctggacgccgtcatcgcgcaggagccg
ctgcaccgagggggaggccaggtcatccccacggccaggagagtggtgtactccgccttc
ctcatggccacacccaggctgatggagccgtactacttcgtggaggtgcaggcgcctgca
gattgtgtgtctgctgtgtacaccgtgttggctcgaaggagaggacacgtgacccaggac
gcccccatccccggctcgcccctctacaccatcaaagccttcatcccggccatcgactcg
ttcggcttcgagacggacctgcgcacgcacacgcaggggcaggccttcgcgctctccgtc
ttccaccactggcagatcgtccccggcgacccgctggataagagcatcgtgatccggccc
ctggagccacagccggcgccgcacttggcccgagagttcatgatcaagacgagaaggcgc
aagggtctgagcgaggacgtcagcatcagcaagttcttcgacgaccccatgttgctggag
ctggccaagcaggacgtggtgctcaactatcccatgtga
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