Eucyclogobius newberryi (tidewater goby): 140360486
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Entry
140360486 CDS
T10929
Symbol
thbs1b
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny04115
p53 signaling pathway
eny04145
Phagosome
eny04148
Efferocytosis
eny04350
TGF-beta signaling pathway
eny04510
Focal adhesion
eny04512
ECM-receptor interaction
eny04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
140360486 (thbs1b)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
140360486 (thbs1b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
140360486 (thbs1b)
04148 Efferocytosis
140360486 (thbs1b)
09143 Cell growth and death
04115 p53 signaling pathway
140360486 (thbs1b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
140360486 (thbs1b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
140360486 (thbs1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eny04131
]
140360486 (thbs1b)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
eny00536
]
140360486 (thbs1b)
Membrane trafficking [BR:
eny04131
]
Endocytosis
Phagocytosis
Opsonins
140360486 (thbs1b)
Glycosaminoglycan binding proteins [BR:
eny00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
140360486 (thbs1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
VWC2L_2nd
EGF_3
Laminin_G_3
TSP1_ADAMTS
EGF
TSP1_CCN
Laminin_G_2
cEGF
Motif
Other DBs
NCBI-GeneID:
140360486
NCBI-ProteinID:
XP_072301801
LinkDB
All DBs
Position
Unknown
AA seq
1170 aa
AA seq
DB search
MKLMVILLLLMLWTCDCAMVAETRDDNDSVYDLFELVQVPKKNHGVTLVKGDDPYSPAYK
ILNPDLIPPVPEPAFRDLIDTIHADRGFLLLLNFKQFKRTRGSLLTVEKKDGSGPVFEII
SNGKANTLDIVLSTENKQQVVSIEDVDLATGHWKNITLFVQEDRAQLYVGCVDVNTAELD
APIQSILTQDTPNSAQLRIGKGAVKDRFMGVLQNVRFVFGTTLDAILRNKGCQNALSSDT
LLLENINGSSAIRTEFTGHKTKDLQMVCGFSCEDLISMFKELKGLGVVVKELSNELRRLT
DENKLINNRIGIHSGVCIHNGIVRKNKDEWTVDDCTECTCQNSATVCRKISCPLIPCANA
TVPDGECCPRCGTLSDYAEDGWSPWSEWTHCSVSCGQGIQQRGRSCDRINNNCEGTSVQT
RDCYLQACDKRFKQDGSWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQLGGKECVGEGRQ
TEKCQKSPCPINGGWGPWSPWDTCSLTCGGGAQTRKHLCNNPPPKYGGKECVGEAKDTQM
CNKKSCPIDGCLSNPCFAGAKCTSFPDGTWKCGKCPIGYTGNGIKCKDIDECKEVPDACF
EFNGVHRCENTEPGYNCLPCPPRYSGPQPFGKGVEYAAANKQVCTPRNPCMDGSHDCNKN
ARCNYLGHFAEPMFRCECKPGYAGNGHICGEDTDLDGWPNADLVCVENATYHCKKDNCPN
LPNSGQEDYDKDGIGDACDDDDDNDGIPDDRDNCPFIYNPRQYDYDRDDVGDRCDNCPYN
SNPDQTDTDNNGEGDACAVDIDGDGILNEKDNCPYVYNVDQRDTDLDGVGDMCDNCPLEH
NPDQVDSDDDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDDDN
DGIPDDKDNCRLAFNPDQLDSDGDGRGDACKDDFDQDNVPDIYDVCPENFDISETDFRKF
QMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYHEFNSVDFSGTFFINTERDD
DYAGFVFGYQSSSRFYVVMWKQITQTYWSNKPTKAQGYSGLSIKVVNSTTGPGEHLRNAL
WHTGNTPGQVRTLWHDPKNVGWKDFTAYRWHLIHRPRTGHIRVVMYEGKKIMADSGSLYD
KTYAGGRLGLFVFSQEMVYFSDLKYECRDA
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgatggtgatacttttgctcttgatgttatggacctgtgactgtgccatggtc
gcagaaacccgagacgacaatgacagcgtgtacgacctttttgagctggtccaagtccca
aagaagaaccatggggtcactttagtcaagggggacgacccgtacagcccagcctacaag
atcctcaatccggacctaatccctccggtccccgaacctgcttttagggacctcattgac
accatccacgctgaccggggcttcctacttctactcaacttcaagcaattcaaacgaacc
agaggaagcttgttaacggtggagaagaaagacggatccggaccagtttttgagataatc
tccaacggaaaagcaaatactctggacatcgttttatccacagaaaacaagcagcaagtg
gtgtccatagaagatgtggatttggccacagggcactggaagaacatcacgctgtttgtg
caggaggacagagcgcagttgtatgtggggtgcgtggatgtgaacacggcagagttggac
gcacccattcagagcatcctgacgcaggatacgcccaacagcgcacagctgaggatcggg
aagggcgcagtgaaggacaggtttatgggggtcctccaaaatgtgcggtttgtctttggc
acaactttggatgccattcttcgcaacaaaggctgccagaacgcgttgtcaagtgacact
ttgcttttggaaaacatcaatggatcgtctgccatcaggacagagttcaccggacataag
acaaaagacctgcagatggtgtgtggcttctcctgtgaggacctcatcagcatgttcaag
gagctgaagggcctcggtgtggtggtgaaggagctctccaatgaactgcgcagactgact
gatgagaacaagctgatcaacaatcgcattgggatccacagcggcgtctgcatccacaac
ggcatcgtgcgcaagaacaaagacgagtggactgtggacgactgtactgagtgcacttgt
cagaattcagctactgtgtgtcgtaagatctcctgccccctgatcccatgcgccaacgca
acagttccggatggagagtgctgcccccgctgtggcacactgagtgactatgcagaggac
ggctggtctccctggtctgaatggacacattgttcggtatcatgtgggcagggcatccag
cagagaggacggtcctgcgatcgtatcaataacaactgtgagggcacctctgtccagacc
cgagactgctacctccaagcgtgcgacaagagattcaagcaggatggcagctggagccat
tggtcgccctggtcgtcctgctcagttacctgtggggctggcgtcatcactcgcattcgc
ctctgcaattcccccactccacagctagggggcaaggagtgcgtgggagaggggcgccag
actgagaagtgccagaagtctccctgcccaatcaatggaggttggggtccctggtcgccg
tgggatacctgttcactcacctgtgggggaggagcacagacccgaaaacatctgtgcaac
aatccacctcccaaatatggcggcaaagagtgtgtcggagaggccaaggacactcagatg
tgcaataagaaatcctgccctattgatggctgtctgtccaacccttgctttgctggagct
aaatgcaccagcttcccagatggaacctggaagtgtgggaaatgccccattggttacact
ggaaatggcatcaaatgtaaagatattgatgagtgtaaggaggttccagatgcctgcttc
gaatttaacggcgtgcaccgctgcgagaacaccgaacccgggtacaactgtctgccctgc
cctcctcgctactctggaccccagccgtttggcaaaggcgtggaatatgctgcggctaat
aaacaggtctgcactcctcggaacccctgcatggacgggagccatgactgtaacaagaac
gcacgctgtaactacctgggacacttcgcagagcccatgttccgctgcgagtgtaagcct
gggtacgcgggtaatggacacatctgtggagaggacacggatctggacgggtggcccaat
gctgacttggtgtgtgtggagaacgccacctaccactgcaagaaggataactgccctaac
cttcccaactctggacaagaagactacgataaggacggaatcggcgacgcttgtgacgac
gatgatgacaacgatggtattcctgatgatagggacaactgcccgttcatctacaaccct
cgccagtacgactatgacagggacgacgtgggagaccgctgtgataactgcccctacaac
agtaaccccgaccagaccgacacggacaacaacggggagggagacgcctgtgctgtggac
atcgatggagacggaatcttgaacgagaaggacaactgcccgtatgtatacaacgtggac
cagcgcgacacggacttggacggtgtgggagacatgtgcgacaactgccctctggagcat
aatcctgatcaggtggactcagacgacgaccgcgttggggacaaatgtgacagtaaccag
gacatcgatgaggacgggcaccagaacaacctggacaactgcccgtacatccccaacgcc
aaccaggccgaccacgacaaggacggcaagggagacgcctgcgaccatgacgacgacaac
gatggtatccctgacgacaaggacaactgcaggctggcctttaaccccgaccagctcgac
tcagacggcgatggccgtggagacgcctgcaaagacgatttcgaccaggacaacgtgccg
gacatctacgacgtgtgtccagagaactttgacatcagtgagacggacttcagaaagttc
cagatggttcctctggaccccaaaggcacctctcagattgaccccaactgggtggtccgg
caccagggcaaagagctggtccaaactgtcaactgtgatcctgggattgctgtcggttac
cacgagttcaactcagtggactttagtgggacgttcttcattaacacagagagggacgat
gactacgcaggcttcgtgttcgggtaccagtccagctccaggttttatgtggtcatgtgg
aagcagatcacccagacgtactggtctaacaagcccaccaaggcccagggctactccgga
ctgtccatcaaagtggtcaactccaccacaggccccggggagcacctgaggaacgccctc
tggcacacaggcaacacaccaggacaggtccgtactttgtggcacgacccaaagaatgtt
ggctggaaggactttaccgcttacaggtggcatctgatccacagaccaagaacaggacat
atcagagttgtaatgtatgaaggaaagaagatcatggctgattcgggcagtctctacgac
aagacgtacgccggaggtagactaggactcttcgtcttctcacaagagatggtttacttc
tcagaccttaagtatgagtgcagagatgcataa
DBGET
integrated database retrieval system
