Eucyclogobius newberryi (tidewater goby): 140360561
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Entry
140360561 CDS
T10929
Symbol
smg6
Name
(RefSeq) telomerase-binding protein EST1A
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140360561 (smg6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eny03019
]
140360561 (smg6)
03032 DNA replication proteins [BR:
eny03032
]
140360561 (smg6)
Messenger RNA biogenesis [BR:
eny03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
140360561 (smg6)
mRNA cycle factors
Common to processing body (P body) and stress granule
140360561 (smg6)
DNA replication proteins [BR:
eny03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
140360561 (smg6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
PIN_9
Motif
Other DBs
NCBI-GeneID:
140360561
NCBI-ProteinID:
XP_072301913
LinkDB
All DBs
Position
Unknown
AA seq
1553 aa
AA seq
DB search
MADELDRVRISAAELRAEATNPAKISSNQRGQPDNITEEQQKVHKRHKKWEGKKPDLQRY
RATVGRRHRDSEEGEPIVPSQNEDHVPLESQQQLKIKEMMVDRHESTDGGAVLNKGIEDG
VRSDCNNTQKSKKTPPLAKTEENQEKDCDEHDGEQQELAGAAKTPKKSRKPDREFYQPGS
RRKDAREQDKSVNIKTEMLSQSSTSEKEGSKNSSEPKKAVKETNVGNKTLPSEVSIEKLV
NKVGKLSVKKQNKSGERVEETAEASSKKSKQYEKTEIVKSVEKSEEDNRKKSNRRILPTV
WRKGELDKEKTSRPGEEKQGKSNEGRKSNSITNAKSQDAVKNFKSEKVGKRAVERTDQNR
TTPNSKRYSKSYIRRPRNRTNSSSSASSVTSLDCPGAVAATRRRPKHKDNYKETIVLNRG
GRRSHLRSWTTNGESDSESLDGSETSDTAEDRRRKHFERGTERQREDGNRLCRNREGSRG
LLKVSLEKQTTAASHNGETQYRRQVTAPRARGGGILVLPSRTDISQPAEVGQRLFGGIRG
GGPPRSRGGRGGGVRRLWDPNNPDQKPALANMQHHSTPQQHAYFQAGTGYGQLHFLDTDD
EVAGPVQQEEHFRSQQAAAMAYYKFQNSDNPYCYPASSNNPTATSNQRYAYPYMGPYQMA
NGMYASADAGHFVGPYRGGYGQAGTGLNVSYEEAEQQSRGELGRLLRAADSHEAQLSNLL
SRDRLSAEGLDRMGQLRADLLSLYEQVILSDIELSDSQNVDQALWKNVFYQVIERFRQLL
KDPNHESDPSTRNTLLTLLDEGALFFDALLQKLQTVYQFKLEDYMDGVAIRARPLRKVVK
YALISAQRCMICQGDIARYREQASDSTNYGKARSWYLKAQQIAPKNGRPYNQLALLAVYT
KRKLDAVYYYMRSLAASNPILTAKESLMSLFEEAKRKAEQMERKRKQEFDDGSRGPAVSG
RGKEDRARVELWIRPTGQTPGSSHRWGSESSRDSEQDGDLGTVSTSDLNKRFILSFLHAH
GKLFTKVGMESFSGVASRVLQDFRTLLQHNPSVLGSTLLLQIITINLFTIHNAHSRGEEG
ESRSVLQEQSTALGLAMFALLVQRCTELLRGTKTEPESTADENQEPMVKVSAFPTDLREL
LPCIKVWSDWMLGQPDQWNPPPSSIESESSPDVWQVLADLCNVLAHVDHEEVLLYKVDSD
EMESDEDLTLLQLKEDRLLAGFVPLLAAPQEPCYMDKQIDMTIAADCKRVTVLKYFLEAL
CGQEEPLLAFKGGKYVSVACPTPCTNLINQQVSQTEKEPDDVIVEAESSVSASEGDEIEE
ADDGENGIKQLRARRHALVNKLAQEQKRRDKIQAVLQTGGQLELEVQPFFLVPDTNTFID
HLDGLKKLLQSGTYIIVVPLIVITELDGLAKGQDNVVGVGSSGRSNCNTNMAHIKAVQEK
AKAAVFFLEKGFESREPCLRALTSRGNQLESIAFRSEDTSGQQGNNDDVILSCCLHYCND
KAKDFMSDKKNGTVRIRREVVLLTDDRNLRVKALTRNVPVRDIPAFLSWAKVG
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgagcttgacagagtgcgaatctctgcagcggaactccgagccgaagcgaca
aatccagccaaaatcagcagcaatcagagaggacagcctgataatataaccgaggaacag
cagaaggtgcacaagcgacataaaaagtgggaaggcaagaagccagatctgcagcgatac
cgggcaacagtagggaggcgccatcgagacagtgaggaaggtgaacctattgtcccaagt
caaaatgaagaccatgtcccactagaatcacaacaacagctcaaaataaaagaaatgatg
gtggacagacatgagagcacagatggaggagctgttttgaacaaaggaatagaagacgga
gtaagaagtgattgtaataacacccagaagtctaaaaaaacaccaccactcgctaaaaca
gaagagaatcaagaaaaggactgtgatgagcatgatggggaacaacaagaacttgccgga
gctgcaaagacgccaaaaaagtctcgaaaaccggacagagaattttatcaacctggcagc
agaagaaaggatgctagagagcaagacaaatctgtaaatataaaaacagaaatgctgtca
cagtcgagtacatctgaaaaggaagggagtaaaaatagttcagaaccaaagaaagctgtg
aaagagacaaatgttggaaataaaacgttgccatctgaggtgtcaatagaaaaacttgtc
aacaaagtgggaaaacttagtgtaaagaaacaaaacaaatcaggagagagagtggaagag
acggcagaggccagctctaaaaaatcaaagcagtatgaaaaaactgagatagttaaaagt
gttgagaaatctgaagaggacaataggaagaaatcaaaccgtaggatccttcctacggtt
tggaggaaaggagaactggacaaagagaaaacaagtagaccaggagaggagaagcaaggc
aaatccaacgaaggccgtaaaagtaacagtatcactaatgccaagtcacaagacgctgtg
aaaaattttaaaagtgagaaagttggaaaacgagcagtggaaagaacggatcaaaatagg
accaccccaaactcaaaacgttactctaaatcttacataaggcgcccacgaaatcgaaca
aacagcagcagctcagccagcagtgttactagtctggactgtcccggggctgtggcagca
acaaggaggcgacccaagcataaagataattataaagagacaatagttttaaacagagga
ggccggaggagccatttgcggagctggaccacaaacggtgaatctgactctgaatcacta
gatgggagtgagactagtgacacagcagaggacagaaggaggaaacattttgaaagaggt
acggaaagacaaagggaggatggaaatagactgtgcagaaatagagaaggaagtagaggt
ctccttaaggtgtcacttgaaaaacaaactacggcagcgtcacacaatggagagacgcaa
tatcgcagacaagtcacggctccacgtgccagaggtggggggattctagtgctcccatcc
cgcactgacatatcacagccggctgaggtggggcagagacttttcggggggattcgcgga
ggagggccgcctcgaagcagaggggggaggggaggtggggtaaggaggctgtgggaccct
aataacccagatcaaaagccagctcttgcaaacatgcagcaccactcgactcctcagcaa
catgcatattttcaggccggaacgggctacggtcagctccacttcctggacacagatgac
gaagtggcaggtccagtccaacaggaggagcactttagatcccagcaggcagcagccatg
gcttattataaatttcaaaactcagataatccttactgctatcctgcgtcctccaataac
cccacagccaccagcaaccagcgttacgcctatccttacatgggaccataccaaatggcg
aatggcatgtacgctagtgctgatgcggggcactttgtggggccgtacagaggaggttac
gggcaagctggtacagggttaaatgtgtcttatgaagaggcagaacaacagtccagaggg
gagctagggcggctgctgcgggccgcggactctcatgaggcccaactcagtaacctgctg
tcccgggacaggctcagcgcggagggactggatcgcatgggccagctcagggcagacctc
ttgtccctttatgaacaggtgattctctcagatatcgagttatctgattctcaaaatgtg
gaccaggctctctggaaaaatgtcttttatcaagtcattgaacgtttccgccaactgctc
aaagaccctaaccacgagagcgaccccagcaccagaaacacgctgctcactctactggac
gagggagcactgttttttgatgcacttcttcagaaactgcagactgtgtatcagtttaag
cttgaggactacatggacggtgtggccataagagctagaccactgcgtaaagtggtaaag
tatgctctgatcagtgctcagcgctgtatgatctgtcaaggcgacatcgcacgttacaga
gaacaggccagtgactctacaaactacggcaaagctcgcagctggtatctcaaggctcag
cagattgctcctaaaaatggccggccgtataaccagctagctctgctggcagtctacaca
aaaaggaagttagatgctgtgtattactacatgcggagcttggcagcctctaaccccatt
cttactgcaaaagagagccttatgagtttatttgaagaggctaaacgcaaggcagagcag
atggagaggaagaggaagcaagagtttgatgatggctccaggggtcccgcagtgagtggg
cgtggcaaagaggaccgagcccgagtggaactctggattcggcccacgggacagaccccc
ggctcgtcccaccgctggggcagtgagtccagcagagactctgagcaggacggagatctg
ggcacagtcagcaccagtgatctgaataaaaggttcattttgagttttctgcatgcacac
gggaagctcttcactaaagtggggatggagtcattctcgggagtggccagtcgtgttctg
caggactttaggacactgctgcagcacaacccctctgtgctgggcagcactctcctgctg
cagatcatcaccatcaacctgttcaccatccacaacgcacacagcagaggagaggaagga
gagtcccggtctgttctacaggaacagagcacagccctgggtctggctatgtttgcactt
ttggtgcagcgctgcactgagcttctcagagggacaaaaactgaaccagagtccactgca
gatgaaaatcaggagccaatggtgaaggtctctgcatttcccacagacctgcgagaactc
ctgccctgcatcaaagtctggtctgactggatgttaggacagccggatcagtggaatccc
ccgcccagcagcatagagtcagaatccagccccgatgtttggcaggtcctggctgacctg
tgtaatgtgttggcacatgtggaccatgaggaggtgctcctgtacaaagtggactcagac
gagatggagagcgacgaggatctgaccctgctgcagctcaaagaggacagactgctcgct
gggtttgtgccactgctggccgctccgcaggaaccgtgctacatggacaaacagatagat
atgactattgcagctgactgtaaaagagtgacagtgctgaagtactttttggaagccttg
tgtggacaggaagagccactgctggcatttaaagggggaaaatatgtctctgtggcatgt
cctactccatgcacaaatttaataaatcagcaagtttctcaaacagagaaagagccagat
gatgtgattgtggaagcagagtcctctgtttctgcgtcagagggagatgagattgaggag
gctgatgacggcgagaacggcattaagcagctgagggcacgccgccatgctctggtgaac
aaactggcccaagaacagaagagaagggataaaatccaggctgtactgcagacaggagga
caactggagttggaggtgcagcctttctttttggttcctgacaccaatacattcattgat
catttggatggactgaagaaattgctccagagtggcacttacatcatcgttgtgccacta
attgtcataactgagctggatggtttggccaaagggcaggacaacgtggtaggagtgggg
tccagtggccgttcaaactgtaatacaaatatggctcacataaaagcggtgcaggagaag
gccaaagctgctgtgtttttcctggagaaaggttttgagtcccgtgagccctgcctccga
gctctgaccagccgtggaaatcagctcgagtcaattgcgtttcgcagtgaggacacatct
ggacaacagggcaacaacgatgatgtcattctgtcctgctgtcttcattactgcaatgac
aaggctaaggattttatgtctgataagaaaaatgggacagtacggataaggagagaggtt
gtccttctcacagatgatcgtaaccttcgagtcaaagctttgacacgtaacgtcccagtg
agagacattccagcatttctgagctgggctaaagtgggctga
DBGET
integrated database retrieval system
