Eucyclogobius newberryi (tidewater goby): 140368671
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Entry
140368671 CDS
T10929
Symbol
irf3
Name
(RefSeq) interferon regulatory factor 3
KO
K05411
interferon regulatory factor 3
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny04620
Toll-like receptor signaling pathway
eny04621
NOD-like receptor signaling pathway
eny04622
RIG-I-like receptor signaling pathway
eny04623
Cytosolic DNA-sensing pathway
eny05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
140368671 (irf3)
04621 NOD-like receptor signaling pathway
140368671 (irf3)
04622 RIG-I-like receptor signaling pathway
140368671 (irf3)
04623 Cytosolic DNA-sensing pathway
140368671 (irf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
140368671 (irf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eny03000
]
140368671 (irf3)
04131 Membrane trafficking [BR:
eny04131
]
140368671 (irf3)
Transcription factors [BR:
eny03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
140368671 (irf3)
Membrane trafficking [BR:
eny04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
140368671 (irf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
IRF-3
Motif
Other DBs
NCBI-GeneID:
140368671
NCBI-ProteinID:
XP_072311782
LinkDB
All DBs
Position
Unknown
AA seq
457 aa
AA seq
DB search
MAHPRPLLMPWLHAQISSQQYPGVAWTNAERTEFSVPWKHALRHDSSSTDILLFKAWAEV
SGNGRANGDPSVWKRNFRSALRAKGFIMVSDCKNDAANPHKIFRWPDETGSKKNPCLSPD
QPSPDLFEGLPLPTQESQPHLLSEQVYLGEDLFTEPAGDHDILQECLKGLNIGPEAEGFE
PPPEQQRLVEADVIGAHELRGQQQYPVSAEAAVHGAGLPGQPGQPMEGAVGGAYDQERAE
QFLHTITKTDDGSNFKTDFKIKAYYRGKLVLDQLIQNESGLRIVHRPHLVDCGVDPESGL
SLVSLPSLLNMTDQTQANLTQRILDSLGWLDVGVSGHVVYGQRHGEIKAFWSFSDFDQSR
QPQEVTKEPQALYMFKDFMKGMVDFIYGKESPPCTLFFCLGEKWPDPDNKPWSKKLIIVE
VVLTSMEILKNMAVEGGASSLQSVELQMSLEEMMELY
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggctcacccaaggcccctcctcatgccctggcttcacgctcagatcagcagccagcaa
tatccaggagtggcctggaccaacgcggaacgcaccgagttctccgtcccctggaaacat
gctctgcgacacgactcctccagcacagacatactcctcttcaaggcgtgggcggaggtc
agtggaaatgggcgagctaatggcgacccctcggtgtggaagaggaatttccgcagtgcc
ttgagagcgaaaggattcataatggtttctgactgcaagaacgatgctgccaatcctcac
aagatcttcagatggccagatgaaaccggctcaaaaaaaaatccttgtttgtctcctgat
caacccagtccagatttgtttgaaggtttgccccttcctacacaagaaagccagccacat
ttactgagcgagcaggtctatcttggagaggacttgtttacagagccggcaggcgaccac
gacatcctgcaggagtgtttgaagggtctgaatattggtcctgaagcagagggctttgag
cctcctcctgagcaacagcgcctggtggaagcggatgtgattggcgctcatgagttgcgt
gggcagcagcagtatccagtcagcgctgaggctgcggtacatggagctggattgccgggg
caaccaggacagccaatggagggggctgtgggtggggcatacgatcaggagcgggctgag
cagttcctccacaccatcaccaagaccgatgatggaagtaatttcaagactgacttcaag
ataaaagcatattacagaggaaagctggtgcttgatcagcttattcagaatgagtcaggg
ctgcgcattgtccacaggccgcatcttgtggattgtggcgtcgacccagagtcaggactc
tccctggtctctctcccaagccttctgaacatgacagaccagacccaggccaatctgacc
cagaggatcctggactccctgggctggttagacgtgggtgtgtctggtcatgtggtgtac
ggtcagcgacacggggaaatcaaggctttttggagcttctcagactttgaccagagcaga
cagcctcaagaggtcaccaaagagccacaagcactgtacatgtttaaagactttatgaaa
gggatggtagattttatatatggcaaagaaagccccccttgcacgctgttcttttgtttg
ggggagaagtggccggaccctgacaacaaaccctggagtaagaagctcatcatagtggag
gtggtgctgacttccatggagatcttgaagaacatggcggtggaagggggggcctcctct
ctgcagtcggtcgaactgcagatgtcactagaggagatgatggagttgtactga
DBGET
integrated database retrieval system
