Eucyclogobius newberryi (tidewater goby): 140377765
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Entry
140377765 CDS
T10929
Name
(RefSeq) slit homolog 1 protein-like
KO
K06838
slit 1
Organism
eny Eucyclogobius newberryi (tidewater goby)
Pathway
eny04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
eny00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
140377765
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
eny00536
]
140377765
Glycosaminoglycan binding proteins [BR:
eny00536
]
Heparan sulfate / Heparin
Axon guidance molecules
140377765
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
Laminin_G_1
LRR_1
LRRCT
LRR_9
LRR_14
hEGF
LRRNT
EGF_TEN
EGF_DL_JAG
EGF_Teneurin
EGF_3
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
140377765
NCBI-ProteinID:
XP_072319417
LinkDB
All DBs
Position
Unknown
AA seq
1542 aa
AA seq
DB search
MLLLVLTAGGRATKACPTHCTCLGTLVDCHGLGVKTVPKNLPKGTERLDLNGNNLTVITK
FDFSGLKHLRVLHLMVNQISNVERGAFDDLKELERLRINRNRLSQIPELLFQKNEALSRL
DLSENMIQAVPRRAFRGATDLKNLQLDKNHISCIEEGAFRALRSLEVLTLNNNNISTIPV
SSFNHMPKLRTFRLHSNSLRCDCHMTWLSPWLRQRPALGLFTQCSSPPVLRGLNLAELRK
SDFACSGQGVSAFVQPCSLASGSCPPMCTCSNNIVDCRGRGLTAIPAHLPEAMTEIRLEQ
NGIKSVPPGAFTSYKKLRRIDLSNNHISEIAPDAFHGLKALNSLVLYGNKITELPEGVFD
GLASVELLLLNANKIHCVRATAFKDLENLALLSLYDNKIQSVAKGTFNALHSIQTLHLAQ
NPFVCDCHVKWLSDFLRANPIETSGARCASPRRLTNKRIAQIKSSKFRCSAKEQYYIPGS
EDKRLTYECNSKPVCPLKCRCEANVVDCSNLRLTKFPEHLPPATEELRLNNNDLSVLEAT
GAFKGLKQLKKINLSNNKISEIEDGAFEGASSVVELHLTANHLESVRGSMFRGMDGLRML
MLRNNKISCIHNGSFSGLPHVRLLSLYDNQLSSILPGAFDALPNLSTLNLLANPFKCDCR
LSWFGAWLRSRRIVTGNPRCQSPAFLREIPLQDVAAPDFRCEDGWVDDSLCGPGPLCPAH
CTCLDTVVRCSNKHLQNLPRGLPRNLTELYLDGNQFTSVPKELASFKYLQLVDLSNNKIS
SLSDDSFSNMSQLTTLILSYNSLRCVPPQALAGLRSLRLLSLHGNEISELQKGIFSDVAS
LSHLAIGANPLYCDCRLLWLSDWVKSGYKEPGIARCAGPKGMEGKLLLTTPADKFQCSGP
VDEWVQVKCSPCVSSPCLNQGQCRDDQTQNYSCSCPSGFMGKHCETPVDPCVSEPCTNGG
ACISDEQTGGFSCACAFGFHGAFCEVNSDDCEDHGCENGATCVDGVGNYTCLCPPNYTGL
LCEEEEDVCAPGRNPCLHLSTCINAPSAPSAPSAPRCVCVPGWVGPDCGIDNDECLNHRC
QNGAQCEDKLDGYSCLCPEGFSGELCEVRSGPTPCGTVLCLNGASCVQLSRAPQCQCLAG
FEGTCCERLVSVNFIDKDSYVQLQEVTNWSQANITLQVSTAEDNGILLYNGEDEPIAVEL
HQGRVRVTYDPGNQPASAIYSAETVNDGRFHTVELVTFNHMVNLSVDGGEPQTLDSLSRV
PSTVTEAPLYVGGMPEEVLPPSLALPSAPLNTSSFHGCIRNLYINHELQDFARTHMKPGV
VPGCEACAKFPCVNGVCQPNAAQGLQCACHQGWSGDLCDQPITASLTGSDVVTKATEPNP
CENNKCVRGRCVVLDSQMYRCECEAGFHGVLCHQKGAPAPLCQGLLCVNGVCEQTERGES
CTCNPGFTGQSCDIESPCRGEPVRDFHRLQRGGLRCQTTKPFSWVDCRGRCQAGAELSLN
NTSYCCSPLRVRRRKLTFECEDGTTVTQDVEKPVECGCKECL
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgctggttctgacggcgggaggacgagcgacgaaggcttgcccgacgcactgc
acctgcctggggacgctggtggactgccacggcctcggggtcaagacggtgcccaagaac
ctgcccaaaggaaccgagaggctagatctgaacgggaacaacctcaccgtcatcaccaag
tttgacttctctggactcaaacacctcagagttctacatctgatggtgaaccagatctct
aacgtggagcgaggagctttcgacgatctgaaggagctggagagacttcgaataaacagg
aatcgcctgtcacagatccccgagctgctgtttcagaagaacgaagccctgtccagactg
gacttgagtgagaacatgatccaggccgtcccccggagagcgttcagaggagccactgac
ctcaaaaaccttcagttggataagaaccacatcagctgcatcgaggagggagcgttcaga
gctctgcggtcgctggaagtgctgacactgaacaacaacaacatcagcaccatccctgtg
tccagcttcaaccacatgcccaaactgagaactttccgcctccactcaaactctctgcgc
tgcgactgtcacatgacctggctgtcgccgtggctgcgacagaggccagcgctgggactg
ttcactcagtgcagttcccctccggtcctgagggggctcaacctggccgagctacgcaag
agcgacttcgcctgctccggtcagggcgtgagtgcgtttgtccagccctgcagtctggcc
tctggctcctgtccgcccatgtgcacctgctccaacaacatcgtggactgtcgaggccga
ggactcactgccatcccagcgcacctgcccgaggccatgaccgagattcgtttggagcag
aacggcatcaagtccgtccctcccggagccttcacctcctacaagaaactgcggcggatc
gacctgagtaacaaccacatttcagagatcgcccccgatgctttccacggactaaaggcc
ctcaactcccttgtgttgtatgggaataagatcactgagctgcctgagggagtgtttgat
ggactggcgtctgtggagctgctgctgctgaatgcgaataagatccactgtgtccgagcc
acggcctttaaagacctggagaacctggctctgctctcactctacgacaacaagatccag
agtgtggccaaagggaccttcaacgcactgcacagtattcagaccctacacttggctcag
aacccgtttgtgtgcgactgtcacgtcaagtggctctccgacttcctcagagccaatccc
atcgagacgagcggcgcgcgctgcgccagcccacgacgactcaccaacaaacgcatcgct
cagatcaagagcagcaagttcaggtgctcggccaaagaacagtattacattccagggtca
gaggacaagcgcctgacgtacgagtgcaacagtaaacccgtgtgtccgttaaaatgtcgc
tgtgaagccaacgtggtcgactgctccaacctcagactcacaaagttcccggagcacctt
cctcctgccaccgaggaactgcgtctgaacaacaacgacctctcggtgctggaggccact
ggtgctttcaagggcctcaaacagctcaagaaaataaacctgagtaacaataagatctca
gagatcgaggacggtgcgttcgaaggcgcctcgtccgtggtggagctgcacttgacggcc
aatcacctggagtcagtgcgagggtccatgttcagagggatggacggcctgcgcatgctg
atgctgaggaacaataagatcagctgcatccacaacggcagcttcagcggactccctcac
gtgcggctcttgtctctgtacgataaccagctcagcagcattctgcccggagccttcgac
gcgctgcccaacctctccacgctaaacctgctggcaaacccgtttaagtgcgactgccgc
ttgtcctggttcggcgcgtggcttcggagtcgtcgcatcgttacaggaaaccctcgctgt
caaagccccgccttcctcagagaaatcccgctccaggacgtggcagctccagacttcaga
tgtgaagacggctgggtggatgacagtctgtgtggccccgggcccctctgccccgctcac
tgcacctgtctggatactgtggtgcgctgcagtaacaaacacctacagaatctgccccga
ggacttccccgcaacctgaccgaactttatctggatggaaaccagttcaccagtgtcccc
aaagaactggcatcgttcaagtatctgcagcttgtagatttgagcaacaataagatcagt
tctctgtcggacgactccttctccaacatgagccagctcaccactctgatcctcagttac
aactctctgcgctgcgttcctcctcaggctctggcaggactgcgctcactcagactcctt
tcgctccacggaaacgagatctcagagctgcagaagggaatcttcagtgacgtggcctcg
ctctctcatcttgcgatcggagcaaacccgctgtactgcgactgtcggctgctgtggctc
tcagactgggtgaagagcgggtacaaggagccgggcatcgcccgctgtgccgggcccaag
ggcatggagggcaaactgctgctgaccacgcccgctgacaagttccagtgcagcggcccg
gtggacgagtgggtgcaggtgaagtgcagtccctgtgtttcctctccatgtctgaaccag
ggccagtgtcgggacgatcagacccagaactacagctgttcctgtcccagcggcttcatg
ggaaaacactgtgagactccggtggatccatgtgtgagtgaaccctgcaccaacggaggc
gcgtgcatcagcgacgagcagaccggaggattcagctgtgcgtgtgcctttggtttccac
ggtgcgttctgcgaagtgaactctgacgactgtgaagaccacggctgtgagaacggtgcc
acctgtgtggacggagtgggcaactacacgtgcctctgcccccccaactacacaggcctg
ttgtgtgaagaggaggaggatgtgtgcgctccaggaagaaacccctgtttgcacctgtcc
acctgcatcaatgcacccagtgcacccagtgcacccagtgcacccaggtgtgtgtgcgtg
ccgggctgggtgggtcccgactgtggcattgataatgacgagtgtctgaaccatcggtgt
cagaacggagctcagtgcgaggacaaactggacgggtacagctgcctctgtcctgaagga
ttcagtggagagctgtgtgaagtgcgctccggccccactccgtgcgggaccgtcctgtgt
ctgaacggagcgtcgtgtgtgcagctctcccgcgcaccccagtgccagtgtctcgcgggc
ttcgaggggacgtgttgtgagcgtctggtcagtgtgaacttcatcgataaagactcgtac
gtccaactgcaggaagtgaccaactggagccaggccaacatcaccctgcaggtttccacg
gctgaagataacggcattttactctacaatggagaggacgagccaatcgcagtagagctt
caccagggccgcgttcgagtgacctacgaccccggcaaccagcccgccagcgccatctac
agcgcagagacggtgaacgacgggcgtttccacacggtcgagctggtgacctttaaccac
atggtgaacctgtctgtggacggaggagagcctcagaccctggacagtctgagccgggtt
ccgagcactgtgacggaggcgccgctgtacgtgggagggatgccggaggaggtgttgcct
ccgtcgctcgctcttccctctgctcctctcaacacctccagttttcacggctgcatcaga
aacctctacataaaccacgagctgcaggacttcgcccggacgcacatgaagccgggcgtg
gtcccgggatgtgaggcgtgtgccaagttcccctgtgtgaacggcgtgtgccagcccaac
gccgcgcagggtcttcagtgcgcgtgtcaccagggctggagcggagacctctgtgatcag
ccaatcacagccagcctcacaggaagtgatgtcgtcaccaaggcaacagaaccaaaccca
tgtgaaaacaacaagtgcgttagggggcgctgtgtggtgctggactcgcagatgtaccgc
tgcgagtgcgaggcgggtttccacggcgtgctgtgtcaccagaagggggcgccggctccg
ctgtgccagggcctgctctgtgtgaacggagtgtgcgagcagacggagcgaggcgagagc
tgcacctgcaacccgggcttcaccggacagagctgcgacatcgagtctccgtgtcgaggt
gagccggtgcgagacttccacagactgcagagaggaggcctgcgctgccagaccacgaaa
cccttctcgtgggtggactgcagggggcgctgtcaggccggggcggagctgagcctcaac
aacacgtcgtactgctgctcgccgctgagggtgcgcaggcggaaactgacattcgagtgc
gaggacgggacgacggtgactcaggacgtggagaaacctgtggagtgcggctgcaaagag
tgtctgtga
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integrated database retrieval system
