Enterobacter sp. T2: G0034_00435
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Entry
G0034_00435 CDS
T07956
Symbol
ligB
Name
(GenBank) NAD-dependent DNA ligase LigB
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
enz
Enterobacter sp. T2
Pathway
enz03030
DNA replication
enz03410
Base excision repair
enz03420
Nucleotide excision repair
enz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
enz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G0034_00435 (ligB)
03410 Base excision repair
G0034_00435 (ligB)
03420 Nucleotide excision repair
G0034_00435 (ligB)
03430 Mismatch repair
G0034_00435 (ligB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
enz03032
]
G0034_00435 (ligB)
03400 DNA repair and recombination proteins [BR:
enz03400
]
G0034_00435 (ligB)
Enzymes [BR:
enz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
G0034_00435 (ligB)
DNA replication proteins [BR:
enz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
G0034_00435 (ligB)
DNA repair and recombination proteins [BR:
enz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
G0034_00435 (ligB)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G0034_00435 (ligB)
MMR (mismatch excision repair)
DNA ligase
G0034_00435 (ligB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
G0034_00435 (ligB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_DNA_ligase
DNA_ligase_aden
Motif
Other DBs
NCBI-ProteinID:
QIB80268
LinkDB
All DBs
Position
85321..86991
Genome browser
AA seq
556 aa
AA seq
DB search
MWRWISGLMLLWCGYGAAVCPVWSQAKAGKEIASLSAQIKRWDEAYWKQGVSEVNDGVYD
QLNGRLAQWQRCFGHDLSENTLPALTGSVKHPVAHTGVHKAVSKEALGQWMRGQKNLWMQ
PKVDGVAVTLVYRNGKLAQAISRGNGLKGEDWTARVRLIPSVPKEVSGALANSVLQGELF
WMRENHIQRQMGGMNARAKVAGAMMRQNDGALLNQTGIFIWAWPDGPKEMESMLSALSGA
GFSLTAPYTLPARTVDEVEKQRLAWLNTALPFATDGIVVRSAESPSGERWLPGEGNWVMA
WKYPPVAQIAEVRDIHFSVGRTGKISVVAALEPVQLDDKQVQRVSLGSVGRWQRLDIAPG
DQIQVSLAGLGIPRFDKVIWRGTDRQKPEPPASRFHSLSCFYASPECMEQFFARLTWLSS
KQVFNIEGLGESGWRTLWQAHRFEHLFSWLLLTQAQLQSTPGFSPARGLALWHRFNLVRE
QPFIHWMMALGAPLPQASLKALGDMSWQQMRERSAKAWQALPVTGEERTRQIVSWINAPE
IDVLVRWLARQHINGF
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgatggataagcgggttaatgctgttgtggtgtggttatggggcggcggtgtgt
ccggtgtggtcacaggctaaagccggaaaagagattgcatccttaagcgcacagatcaaa
cgctgggatgaagcctactggaagcagggcgtcagcgaggtcaacgacggggtatacgac
cagctcaacggacgcttagcccagtggcagcgctgttttggccatgatctctcagagaac
accttacctgcgctgacgggaagcgtaaaacatcctgttgcccatacgggggtgcataag
gcagtcagcaaagaagcgctaggtcagtggatgcgaggccagaaaaatctctggatgcag
ccaaaagtcgacggcgtcgcggtgacgctggtgtatcgcaacggaaagctcgcccaggct
atcagtcgtggtaatgggttaaaaggtgaggactggaccgctcgcgtgcgtttgattccg
tcagtgcctaaagaggtatccggcgcgctggcaaacagcgtcctgcagggggagcttttc
tggatgcgcgagaatcatattcagcggcagatgggcggaatgaatgcacgcgcaaaagtg
gcgggggcgatgatgcggcagaacgacggtgcgcttctgaaccagacaggaatatttatc
tgggcctggccggatggtccgaaagagatggaaagtatgctttcggcgctttccggagct
gggttttccctgacggcgccctataccttgcccgcccgaacggttgatgaagttgaaaag
cagcgtttggcctggctaaacacagcattaccctttgccacggatggcattgtggttcgg
tccgcagagtcgccttcaggggagcgctggctgcctggcgaaggcaactgggtcatggcg
tggaaatatccgccagttgcgcagattgctgaggtcagggatattcatttttcagttggg
cgtacgggtaaaatttccgtcgtggcggcgctggagccggtgcaactggatgataaacag
gtacagcgggtgagcctggggtcggttggacgctggcagaggctggatattgcccctggc
gatcagatccaggtgagccttgccgggctgggtatcccacggtttgataaggttatctgg
cgagggacggacagacaaaaaccagaaccaccggcctcgcgttttcactccctgagctgt
ttttatgcttcgccagagtgtatggaacagttcttcgcccggttgacgtggctcagttct
aagcaggtattcaacattgaaggattaggcgagtcaggctggcgaacactctggcaggcg
catcgttttgaacatctcttctcatggctgctcttaacgcaggcgcagctccagtctacg
ccggggttttctccagcgcgggggctggcgctctggcatcgcttcaacctggtacgtgaa
caaccttttatccactggatgatggcgttgggtgcgccattgccacaagcctcgctgaag
gcgttgggggatatgtcatggcaacagatgcgtgaacgcagcgcaaaggcgtggcaggcc
ttgccggttacgggggaagagaggacgcggcagatcgtgagctggataaatgcaccagag
attgatgtgctggtccggtggcttgcccggcagcacatcaacggtttctga
DBGET
integrated database retrieval system
