Enterobacter sp. T2: G0034_16655
Help
Entry
G0034_16655 CDS
T07956
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
enz
Enterobacter sp. T2
Pathway
enz03030
DNA replication
enz03410
Base excision repair
enz03420
Nucleotide excision repair
enz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
enz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G0034_16655 (ligA)
03410 Base excision repair
G0034_16655 (ligA)
03420 Nucleotide excision repair
G0034_16655 (ligA)
03430 Mismatch repair
G0034_16655 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
enz03032
]
G0034_16655 (ligA)
03400 DNA repair and recombination proteins [BR:
enz03400
]
G0034_16655 (ligA)
Enzymes [BR:
enz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
G0034_16655 (ligA)
DNA replication proteins [BR:
enz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
G0034_16655 (ligA)
DNA repair and recombination proteins [BR:
enz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
G0034_16655 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G0034_16655 (ligA)
MMR (mismatch excision repair)
DNA ligase
G0034_16655 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
G0034_16655 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
Nlig-Ia
DNA_ligase_ZBD
PTCB-BRCT
HHH
DZR_2
DUF2229
Zn_ribbon_NUD
Motif
Other DBs
NCBI-ProteinID:
QIB83228
LinkDB
All DBs
Position
complement(3456801..3458816)
Genome browser
AA seq
671 aa
AA seq
DB search
MDSIEQQLTDLRTTLRHHEYLYHVMDAPEVPDAEYDRLMRELRELEAQHPELITPDSPTQ
RVGAEPLGAFSQVRHEVPMLSLDNVFDEESFLAFNKRVQDRLKSSDALTWCCELKLDGLA
VSLLYENGVLVRAATRGDGTTGEDITTNVRTIRAIPLKLQGDNIPARLEVRGEVFLPQAG
FEKINEEARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGILEGGELPDTHL
GRLMQFKAWGLPVSNRVQLCDSPEAVLAFYHKVEADRPTLGFDIDGVVIKVNSLALQEQL
GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVQVAGVLVSNATLHN
ADEIERLGLRIGDKVVVRRAGDVIPQVVNVVESERPDDTREVVFPTHCPVCGSDVERVEG
EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFKLTAG
KLTGLDRMGPKSAQNVVNALEAAKETTFARFLYALGIREVGEATAAGLAAYFGTLEALEK
ASIDELQKVPDVGIVVATHVFNFFAEESNREVIGKLLAEGIKWPAPVVVNAEEIDSPFAG
KTVVLTGSLSQLSRDDAKARLVALGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI
DEAEMMRLLGE
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggactcaatcgaacaacaactcactgacctgcgaaccacgcttcgccatcatgaatat
ctctatcatgttatggacgcgccggaggtgccggatgcggagtatgaccgcctgatgcgc
gagctgcgcgaactggaggcgcagcacccggaactcattacgccggattctcccacccag
cgtgtcggtgccgagccgctgggagcgttcagccaggtacgccatgaagtaccgatgctg
tcgctggataacgtctttgatgaagagagcttcctcgcgtttaacaagcgcgtgcaggac
cgtctgaaaagcagcgacgctctcacctggtgctgcgagctgaagcttgatggcctggcg
gtcagtcttctctacgaaaacggcgtgctggtgcgtgccgcgacgcgtggcgacggcacg
acgggtgaagacattacgaccaacgtgcgtaccatccgcgcgatcccgctgaagctgcag
ggggacaacattcctgcgcgtctggaagtgcgcggcgaagtgtttcttccccaggcgggt
ttcgagaaaatcaacgaagaagcgcgccgcaccggcgggaaagtatttgctaacccgcgt
aatgcggcggctggctctttacgccagcttgacccgcgtatcaccgcgaagcgaccgctc
actttcttctgctatggcgtggggatcctggagggaggcgagctgccggatacgcacctc
gggcgcctgatgcagtttaaggcgtggggtctgccggtgagtaaccgcgtacagctctgt
gactcgccagaagcggtactcgcgttctaccacaaggtggaagcggaccgtccgacgctc
ggttttgatattgatggcgttgtcattaaggtgaactcactggcgcttcaggagcaactc
gggtttgtggcacgtgcgccgcgctgggcggtggcgtttaagtttcctgctcaggaacag
atgaccttcgttcgcgatgtggagttccaggtcggccgtacgggtgccattaccccggtc
gcccgtcttgagcctgtgcaggtcgcgggcgtgctggtgagtaacgccacgctgcataac
gccgatgagattgaacgtctgggcctgcggattggtgacaaagtggtggttcgtcgcgcg
ggcgatgttattccgcaagtggtgaacgtcgttgagtctgaacgccctgatgatacgcgt
gaagtggtcttcccgacccattgcccggtgtgtggctctgacgtggagcgtgttgaaggt
gaggcggtagcgcgctgtacgggcggcctgatctgtggcgcgcagcgtaaagagtcactg
aagcacttcgtctcccgtcgcgccatggacgtcgacggcatgggcgataagattatcgat
cagctggttgaaaaagagtatgtgcatacgccagcggatctcttcaaactgacggcgggc
aagctgaccggtctggatcgcatggggccgaagtcggcgcagaacgtggttaacgctctg
gaagccgcaaaagagaccaccttcgcccgtttcctttacgcgctgggcatccgtgaagtg
ggggaagcaacggcagcaggtctggcggcgtactttggcacgctggaggcgctggaaaag
gcaagcatcgacgagctgcagaaagtgccggatgtcggcattgtagtcgccacgcacgtc
tttaacttctttgcggaagagagcaaccgcgaagtcattggcaaactgctggcagagggc
atcaaatggcccgcgccggtggtggttaatgccgaagagatcgacagtccgttcgccggt
aaaacggtggtgctgaccggcagcctgagccagctttcacgcgacgatgcgaaagcgcgt
ctggtggcgctgggcgcaaaagtggcgggcagcgtgtcgaagaaaaccgacctggtgatt
gccggggaagcagcgggttcgaagctggcgaaagcccaggaactcggcattgaggttatc
gacgaagcggaaatgatgcgtctgttaggagagtaa
DBGET
integrated database retrieval system
