Emys orbicularis (European pond turtle): 135878132
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Entry
135878132 CDS
T11511
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob04620
Toll-like receptor signaling pathway
eob04621
NOD-like receptor signaling pathway
eob04622
RIG-I-like receptor signaling pathway
eob05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
135878132 (TRAF3)
04621 NOD-like receptor signaling pathway
135878132 (TRAF3)
04622 RIG-I-like receptor signaling pathway
135878132 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135878132 (TRAF3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF3_RING
zf-TRAF
CCDC18_1st
zf-C3HC4
ATG16
zf-C3HC4_2
CCDC18_2nd
Cast
Med28
CEP104_ZnF
MPS2
Sina_ZnF
ODF2_N
Rod_CreS
ADIP
Tropomyosin
CEP135_TSGA10_CC
NOCA1_mid
zf-C3HC4_4
zf-RING_6
zf-RING_UBOX
T4SS_LegC2C7
Spc29
Astrin_C
DUF1664
Mua
SPATA24
Csm2_III-A
T3SSipB
KxDL
HrpB7
SNARE
Motif
Other DBs
NCBI-GeneID:
135878132
NCBI-ProteinID:
XP_065259783
LinkDB
All DBs
Position
4:complement(22420954..22460394)
Genome browser
AA seq
566 aa
AA seq
DB search
MDTSKKTEPPVSVEMVQQRANPDHTPGSIYVPEQGGYKEKFVNTVEDKYKCEKCHLILCN
PKQTECGHRFCETCINALLSSSNPKCTACQENIVKDKVFKDNCCRRELLALQIYCRNENK
GCNELLTLAQLLMHLRNDCQFEELSCHRADCREKILRKDLPDHVEKTCKYRETTCKYCKS
QVPMITLQKHEDTDCPSVAVSCPHKCSVTSLLRSELNAHLSECINAPSTCSFKRYGCTFQ
GTNQQIKAHEASSAVQHVNLLKEWSNSLENKVAMLQNESLEKNKSIQTLHNQICSFEIEI
ERQKEMLRNNESKIHHLQRVIDNQAEKLKELDKEIRPFRQNWEEADIMKSSVESLQNRVS
ELESVDKTAGQGARNTAVLETQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKI
RDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEY
DALLPWPFKQKVTLMLMDQGASRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTV
LENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggacaccagtaaaaagacagaaccccctgtgtctgtagaaatggtacaacaaagggcg
aaccctgatcatactccaggatcaatttatgttccagaacaaggcggttataaagagaaa
tttgtaaacacagtggaagacaaatataaatgtgaaaagtgtcatctcatattgtgcaat
cctaaacagacggaatgtggccacagattctgtgaaacctgcattaatgcattgttaagt
tcttctaatccaaaatgtacagcgtgtcaagagaacatagttaaagataaggtatttaag
gataactgctgtaggagagagcttcttgcccttcagatatattgcagaaatgaaaacaaa
ggctgcaatgaactattaacactggcacaattactgatgcatttgagaaatgactgtcag
ttcgaagaactttcatgccaccgtgctgattgcagagagaaaatattgcggaaggacttg
ccagaccatgtagaaaagacctgtaaatatcgggaaactacatgtaaatactgtaaaagc
caagtcccaatgattacattacagaaacatgaagatacagactgcccttctgtcgcggtt
tcatgtcctcataaatgcagtgttacatcactcttgaggagtgagttgaatgcacatttg
tcagaatgtattaatgccccaagtacctgtagttttaagcgttatggctgcacttttcag
ggaacaaatcagcaaattaaagcacatgaagccagctcagcagtgcagcatgtaaattta
ttgaaagaatggagtaattctctagaaaataaggtggccatgctccagaatgaaagtttg
gaaaagaacaagagtatacaaactttacataatcagatttgtagctttgaaatagaaatt
gaaagacagaaggaaatgctgcggaataatgaatctaaaatacatcatttacagcgagtg
atagacaatcaagcagagaaattgaaagaactggacaaagagatccgcccattccgacag
aattgggaggaggcagacatcatgaagagcagtgtggagtcccttcagaatagagtgagt
gaactggaaagcgttgataaaactgcaggacaaggagctcgaaatacagccgtactagag
acacagctaagtagacacgatcaaatgctgagtgttcatgatattcggttggctgacatg
gacctccgattccaggtgttagaaactgccagttacaatggagtattaatttggaaaatt
cgagattataaacgtcggaaacaagaggccgtcatggggaagactctgtccttgtacagc
cagcctttctatactggatactttggctataagatgtgtgccagagtttaccttaatgga
gatggcatgggaaaagggacgcacttgtcattgtttttcgtcataatgcgtggagaatat
gatgccttacttccttggccatttaaacagaaagtgactctgatgctaatggatcaggga
gcttctcgacgtcacttaggagatgctttcaagccagatccaaacagcagtagtttcaag
aagcctactggagaaatgaacattgcatctggctgcccagtctttgtggctcaaacagtt
ctagaaaatggaacgtatattaaagatgatactatttttattaaagtcatagtggatact
tcggatctaccagacccctga
DBGET
integrated database retrieval system
