Emys orbicularis (European pond turtle): 135880258
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Entry
135880258 CDS
T11511
Symbol
C9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135880258 (C9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eob04131
]
135880258 (C9orf72)
Membrane trafficking [BR:
eob04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
135880258 (C9orf72)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C9orf72-like
PH_PLEKHM2
Motif
Other DBs
NCBI-GeneID:
135880258
NCBI-ProteinID:
XP_065262563
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All DBs
Position
6:complement(115838657..115861803)
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AA seq
481 aa
AA seq
DB search
MSALCPPPSPAVAKTQISLNGDSPLLAATFAYWDNILGPRVRHIWAPKTEQMLLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLAEKGVIIVSLIFDGNWNGDRSTYGLSIILPQSE
LGFYLPLHRVCVDRLTHIIRKGRIWMHKERQEHFQKIVLESTERMEDQGQSIIPMLTGEV
IPVMELLSSMKSHSVPEEINISDTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVIGSS
AEKVNKIVRTLCLFLTPSERKCSRLCRNESSFKYESGLFVQGLLKDATGSFVLPFRQVMY
APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELAAFWRANSDEEMAQDITIHTDESV
TPDLNVFQDVLHRDTLVKAFLEQVFHLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT
QKGKKPFKSLRSLKIDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPFYTSVQERDVLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctctctgtccacctccttctcctgcagttgccaagacacagatctccttgaat
ggggactcaccattactagctgctacttttgcctactgggacaatattcttggacctaga
gtcagacacatctgggccccaaagacggaacagatgcttctcagtgatggagaaataact
tttcttgcaaatcacacattgaatggggaaatacttaggaatgcagagagtggagcaata
gatgtgaagttttttgtcttggcagaaaaaggagtaattattgtgtcattaatctttgat
ggaaactggaatggggacagaagtacatatggactatcaattatacttccacaaagtgaa
cttggcttctatcttcctcttcacagagtgtgtgttgataggttaacgcatattataagg
aaaggaagaatatggatgcataaggagaggcaagaacatttccagaagattgtcttggaa
agcacggagagaatggaggatcagggccaaagcatcattccaatgctgacgggagaagtt
attcctgtaatggaacttctttcatctatgaaatcacacagtgttccagaagaaataaat
ataagtgacacagtgttaaatgatgatgacattggggacagttgccatgaaggttttctc
ctcaatgccataagttcacacctgcagacttgtggttgctctgtggttataggtagcagt
gcagagaaagttaataagatagtgaggacattgtgtctgtttcttactccatcagaacgg
aagtgttccagactctgtagaaatgaatcttccttcaaatatgaatcaggactctttgtt
caaggcttgcttaaggatgcaactggaagctttgtgttgcccttccgtcaagtaatgtat
gctccatatcctactacacatatagatgtggatgtcaacacagtgaagcagatgccccct
tgccatgaacatatctataatcaacggcgatacatgaggtccgagctggcagcattttgg
agagccaattcagatgaagagatggctcaggatatcactatccatacagatgaaagcgtc
actcctgatttgaatgtttttcaagatgtcctgcatcgtgatacattagtaaaagccttc
ctggagcaggtctttcatttgaaacctggcttgtctctgaggagtactttccttgcccag
tttctgctagtccttcatagaaaagccttaactcttataaagtacatagaggatgatacg
cagaaaggaaaaaagccttttaagtctctccgtagcttaaaaatagaccttgacttaaca
gcagagggcgatcttaacataataatggctttagctgagaagatcaaacctggtctacat
tcctttatctttgggagacccttctacactagtgtacaagaacgtgatgtactaatgaca
ttttaa
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