Emys orbicularis (European pond turtle): 135882347
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Entry
135882347 CDS
T11511
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob04514
Cell adhesion molecule (CAM) interaction
eob04517
IgSF CAM signaling
eob04520
Adherens junction
eob04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
135882347 (PTPRF)
04517 IgSF CAM signaling
135882347 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
135882347 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
135882347 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
eob01009
]
135882347 (PTPRF)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
eob04515
]
135882347 (PTPRF)
Enzymes [BR:
eob01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
135882347 (PTPRF)
Protein phosphatases and associated proteins [BR:
eob01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
135882347 (PTPRF)
Cell adhesion molecules [BR:
eob04515
]
Immunoglobulin superfamily
Type II RPTP family
135882347 (PTPRF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_VIN3
Fn3_ROS1
Ig_2
ig
fn3_2
Fn3_PBP1
Ig_VEGFR-1-like_5th
Interfer-bind
PTP-SAK
Tc-R-P
DSPc
V-set
C2-set_2
Y_phosphatase3
fn3_SORL1
PTPlike_phytase
PTP-NADK
Ig_C17orf99
Fn3_PTPRU
Insulin_TMD
ICAM_N
Ig_ANOS1
TMEM154
Motif
Other DBs
NCBI-GeneID:
135882347
NCBI-ProteinID:
XP_065265313
LinkDB
All DBs
Position
8:1010193..1373176
Genome browser
AA seq
1888 aa
AA seq
DB search
MSSTEADSKPSFMKAPEDQIGISGGVASFVCQATGEPKPRITWMKKGKKVSSQRFEVIEF
DDGSGSVLRIQPLRVHRDEAIYECTATNSVGEINTSAKLTVLEEDHLPSGFPTIDMGPQL
KVVEKARTATMLCAASGNPDPEISWFKDFLPVDTAASNGRIKQLRSGGTPIRGALQVENS
EESDQGKYECVATNSAGTRYSAPANLYVRDQREVRRVAPRFSIPPSNHEVMPGGSVNLTC
VAVGAPMPYVKWMAGVEELTKEDEMPVGRNVLELNNIVQSASYTCVAMSSLGMIEATAQI
TVKALPKPPTEPLVTETTATSVTLTWDSGNSDPISYYVIQYKPKSWEGPFQEVDGVATTR
YSIGGLSPFSEYEFRIIAVNNIGRGPPSDLVEARTGEQAPSSPPLKVQARMLSASTMLVQ
WEQPEEPNGQIRGYRVYYTTDPHLPLSMWQKHNTDDSHLTTVGSLITGTTYSIRVLAFTS
VGDGPPSDIIQVKTQQGVPAQPADFQAEAESDTRILLTWLPASQERITKYELLYWEGEDG
SQRKVNFDPSSSYAVEGLKPDTLYKFQLGARSELGLGVYTPVLEARTAQSTPSAPPQEVE
CVSTSSTTIRVSWVPPPAQSRNGVITQYSIAYQAVDAEDGAKHVVDGIGRERSSWEIKDL
EKWTEYKVWVRAHTDVGPGPESSPVHVRTDEDVPSAPPRKVEVESVNSTAIRVSWKLPLS
NKQHGQIRGYQVTYVRLENNEPRGQPVIKDVMLAEAQWRAEDSIDHETIIGGLLPETTYS
VTVAAYTTKGDGARSKPKVVTTTGAVPGKPSMLISTTAMNTALIQWHPPKEMVGELLGYR
LQYKRTDEEKMNIMDFEKNVHHYTVTSLHKGATYIFKLSAKNRAGPGEEFEKEITTTEDV
PSGFPQNLRVVGLTTSTTEVAWDPPVLAERNGRITNYTVMYRDINSQQELTNVTKETSIM
LTNLRPDTTYDIKVRACTSKGVGPLSPSIQSRTMPVEQVFAKNFRVSAVMKTSVLLSWEV
PDSYKSAVPFKILYNSQSVEVDGHSMKKLISDLQPDTEYSFVLMNRGSSAGGLQHRVSIH
TAPDVLQSKPISTNKYMQEGKFTLTLPKVQISAPVRWYYIVVVPVDQTTSSRTARWRTPD
EMELDQLLEAISQGGLGRRQRRQADRLKPYIAAQVDMLPETFTLGDEKTYKGFYNKPLSE
DLSYRCFVLASLEDGETKRYAASPYSDEIVMSSAKQQDEPEMLWVMGPVLAVILIIIIVI
AILLFKRKRANSPSSKDEHSIGLKDSLLAHSSDPVEMRRLNYQTPGMRDHPPIPVTDLAD
NIDRLKANDGLRFSQEYESIDPGQQFTWENSNLEVNKPKNRYANVIAYDHSRVILTSVDG
VPGSDYINANYIDGYRKQNAYIATQGPLPETLSDFWRMVWEQRTATIVMMTRLEEKSRVK
CDQYWPGRGTETYGLIQVTLLDTVELATYTVRTFALYKNGSSEKRELRQFQFMAWPDHGV
PEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGH
VTCMRSQRNYMVQTEDQYIFIHESLLEAATCGNTEVPARNLFAHLQKLSQVPPGESVTAM
ELEFKLLANSKAHTSRFISANLPCNKFKNRLVNIMPYELTRVCLQPIRGVEGSDYINASF
IDGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMGREKCHQYWPAERSA
RYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFI
GQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMFQTVKTLRTQRP
AMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5667 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaacggaggcagacagcaagccaagctttatgaaagctcccgaagatcagatt
gggatttctggaggagtggcctcctttgtgtgccaggcaacaggggagcccaagcctcgc
atcacatggatgaagaaggggaagaaggtcagctcccagcggtttgaggttattgagttt
gatgatgggtcaggatcagttctccggattcaacccctgcgtgttcatcgagatgaagca
atctatgagtgcaccgcaaccaacagtgttggggagataaacaccagtgccaaattaaca
gtgttagaagaagatcacctcccatctggctttccaaccattgacatgggcccgcagctg
aaggtggtagaaaaggcccgcacagccactatgctctgcgctgccagtggcaaccccgat
cctgaaatctcttggttcaaggacttccttcctgtggatacagcagctagcaatgggcga
atcaagcagctccgttcaggtggtacaccaatcagaggggctctgcaagtagagaacagt
gaggagtcagaccaaggcaaatatgaatgtgttgcaaccaacagtgcaggaacccgctac
tctgctccggctaacctttacgttcgagatcagcgagaagtgcggcgtgtcgcacctcga
ttctcgatccctcccagcaaccatgaggtgatgcctggggggagtgtgaacctcacgtgt
gtggcagtgggcgcaccaatgccctatgtgaagtggatggctggcgtggaggaactgacc
aaagaagatgagatgcctgtcggcaggaatgtcctggagctgaacaacattgtgcagtct
gccagctacacctgcgtggccatgtcctctctaggcatgatcgaagccacggcccagatc
actgtcaaagcgctgccgaagccaccgacggagccactagtgactgagacaacagccacc
agcgtgaccctcacctgggactctggcaactccgaccccatctcttactacgtcatccag
tacaagcccaagtcctgggagggcccgtttcaggaggtggacggcgtagcgacaacccgc
tatagcatcggtggcctcagcccgttctcggagtacgagttccgcatcattgccgtcaat
aatatcgggcgggggcctccgagcgacctagtggaggcccggaccggagagcaggctcct
tccagcccgcccctgaaggtccaggcgcggatgctgagcgccagcaccatgcttgtgcag
tgggagcagccggaggagcccaacggacagatccgagggtaccgggtttactacactacg
gacccccatctgcctctgagcatgtggcagaaacacaacacagacgacagtcacctcacc
actgtgggcagcctgatcacagggaccacctacagcatccgtgtcttggccttcacctcc
gtgggagatgggcctccctcggacatcatccaggtcaaaactcagcaaggggttccagcc
caaccagctgatttccaggcagaggcagagtctgatacccggatcctgctgacgtggctc
ccagcctcacaggaacgcattacaaaatacgagctgctgtactgggaaggagaggatggg
agtcagcgcaaggtgaactttgacccaagctcatcgtacgcggtggaaggtctcaagcct
gacacgctgtacaagttccagctgggagcccgttcggagctggggctgggggtgtacacc
ccagttctagaagccagaactgcccaatccaccccttccgccccaccccaagaagtcgag
tgtgtaagcaccagctccactaccatccgggtaagttgggtgccaccgcctgctcagagc
cgcaatggggtcatcacgcagtactccattgcctaccaggcggtggacgcagaggacggc
gccaagcacgtagtggatggaattggacgggagcgctccagctgggagatcaaggacctg
gagaaatggacagagtacaaggtgtgggtacgggcccacacagatgtggggcctggacca
gagagctccccggtgcatgtgcgcactgatgaggacgtgcccagcgccccaccacgaaag
gtggaggtggagtctgtgaattcaacagccatccgggtcagctggaaactgccactctcc
aacaagcagcatggacagatccggggataccaggtcacttatgtgaggctggaaaacaat
gaaccgcgagggcagcctgttatcaaagatgtcatgttagcagaggcccagtggagggct
gaggactccatcgaccatgaaaccatcatcggaggccttctacctgaaaccacctattcc
gtcaccgtcgcagcctacaccaccaaaggagatggtgcacgcagcaaacccaaagtcgtc
actacgacgggggcggtcccaggcaagccctccatgctgattagcacaacagccatgaac
accgctctcatccagtggcaccccccaaaggagatggtcggggagctgctggggtaccgg
ctgcagtacaaacgcaccgacgaggagaagatgaacatcatggactttgagaaaaacgtc
catcactacactgtgaccagcctgcacaaaggtgccacctacatcttcaagctgtctgcc
aagaacagagccggtccaggggaggagttcgagaaggagatcaccacgaccgaggacgtg
cccagcggcttcccgcagaacctgcgtgtggtggggctcaccacctccaccacagaggtg
gcctgggaccccccagtgctggcggaacgaaatgggagaattaccaactacacagttatg
tacagagatatcaacagccagcaggagctgaccaacgtcaccaaggagacgagcatcatg
ctgaccaacctcagacctgacaccacctatgacatcaaagtgagggcctgcaccagcaag
ggggtggggccgctcagccccagcatccaatcccggaccatgcctgttgagcaagtgttt
gctaagaactttcgggtcagcgccgtgatgaaaacgtccgtgttgctgagctgggaagtg
cctgactcctacaagtctgcggtgcctttcaagatcctgtacaacagccagagtgtggag
gtggacggccattcgatgaagaagctcataagcgaccttcagccggatacagagtattcc
tttgtgctaatgaaccgcggcagcagcgctggtgggctccagcaccgggtatctatccac
acggctcctgatgtcttgcagagcaaacccatctccacaaacaaatacatgcaggaagga
aagttcaccctcacccttcccaaagtccagatctcagcgccagttaggtggtactatatt
gtggttgtgccagtagatcaaaccaccagcagccgcacggccaggtggcggacgcctgat
gagatggagctggaccagttactggaggccatcagccagggcggcctgggcaggcgccag
cggcgtcaggcagacaggctgaagccctatatcgctgctcaagtggacatgttgccagag
accttcaccttgggagatgagaagacctacaagggcttctacaacaagccgctctctgag
gatctgagctatcgctgctttgtgctggcgtcgctggaggacggcgagacgaagaggtac
gcagccagcccctactcggatgagattgtgatgtcttcggcgaagcagcaggacgagccc
gagatgctgtgggtgatgggaccggtgctggccgttatattaatcatcatcatcgtcatt
gctatcctgctcttcaaaaggaaaagagccaactccccctcgtccaaggacgagcactcc
atcggcctcaaggactccctgctggctcattcctccgaccctgtcgagatgaggcgcctc
aactaccagaccccaggtatgcgagaccacccgccgatcccggtgacggatctcgctgac
aacatcgacaggctgaaggccaacgacgggctgaggttctcccaggagtacgagtccatc
gatccagggcagcagttcacctgggagaactccaacctggaagtgaataaaccaaaaaac
cgctatgcaaacgtgattgcctacgaccactcgcgtgtcatcctgacctctgtcgatggg
gtgcccggcagtgactacatcaacgcgaactacatcgatgggtaccggaagcagaatgcg
tacatcgctacccaggggcccctgccagagacgctcagcgacttctggaggatggtgtgg
gagcagaggacagcgaccatagtcatgatgacccggctggaggagaaatccagggtgaag
tgtgaccagtactggccaggccggggcacagagacctacgggctgattcaggtgaccctg
ctggacaccgtcgagctggctacctacaccgtccggacgtttgcactctacaagaacggc
tccagtgagaagcgagagttacgccagttccagttcatggcgtggccggaccatggggtg
ccggagtaccccacccccatcctcgccttcctgcgccgggtgaaagcctgtaaccccctt
gatgctgggcccatggttgtccattgcagcgctggcgtgggcaggacgggctgcttcatt
gtcatcgatgccatgctggagaggatgaagcatgagaagacggtcgacatctatggccac
gtgacgtgcatgagatctcagcgtaactacatggtgcagaccgaggaccaatacatcttc
atccacgagtccttgctggaggcagccacctgcggcaacaccgaagtgcccgcccgcaac
ctctttgctcacctccagaagctgagccaggtgcccccgggcgagagcgtcactgcaatg
gagctggaattcaagctcctggccaactccaaagcacatacctcgcggttcatcagtgcc
aacctaccatgcaacaaatttaagaatcgcctggtgaacatcatgccgtacgagctgacc
agagtctgcctgcagcccatccgtggggtcgagggctccgattacatcaacgccagcttc
atagatggctacaggcagcagaaagcctacattgccacgcaggggcccctggcagagacc
acggaggatttctggcgcatgctctgggagcacaactccaccatcgtggtgatgctgact
aagctccgcgagatgggccgggaaaagtgccaccagtactggccggcggagcgctcggcc
cgctaccagtactttgtggtggaccctatggcagagtacaacatgccccagtacattctc
cgtgagttcaaggtcaccgacgccagggatgggcagtcgcggaccatccgccagttccag
ttcacggactggcccgagcagggagtgccgaagaccggcgagggcttcatcgacttcatc
gggcaggtgcacaaaaccaaggagcagtttggccaggatgggcccatcacggtgcactgc
agcgctggggtcgggcgcacaggggtgttcatcacgctcagcatcgtcctggagcgcatg
cgctacgaaggggtggttgacatgttccagacggtgaagaccttgcgaacgcagcgacca
gccatggtgcagacagaggaccagtaccagctgtgctacagagcagcgctggagtatctc
ggcagctttgaccactatgcaacgtaa
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integrated database retrieval system
