Emys orbicularis (European pond turtle): 135884635
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Entry
135884635 CDS
T11511
Symbol
LFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
eob
Emys orbicularis (European pond turtle)
Pathway
eob00514
Other types of O-glycan biosynthesis
eob04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
135884635 (LFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
135884635 (LFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
eob01003
]
135884635 (LFNG)
Enzymes [BR:
eob01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
135884635 (LFNG)
Glycosyltransferases [BR:
eob01003
]
Glycan extension
O-Glycan
135884635 (LFNG)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
DUF2785
Motif
Other DBs
NCBI-GeneID:
135884635
NCBI-ProteinID:
XP_065268130
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All DBs
Position
10:complement(11220959..11238061)
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AA seq
382 aa
AA seq
DB search
MLKSCGRKLLLFLVGCMFTCLLVLMADQQKRQVEDLGGEGGRRALQSLASPGEPKGLPRQ
PQLQEGEPGLAPREVKSFTDYFSKLSRGRREAQDAGSLAPSREGTPRPALEDITAQDVFI
AVKTTKKFHKARLELLLDTWISRNRDLTFIFTDGEDEELKKRTANVINTNCSAAHSRQAL
SCKMAVEYDKFIESGRKWFCHVDDDNYVNVRTLVKLLSGYPHTQDIYIGKPSLDRPIQAT
ERISENKMHPVHFWFATGGAGFCISRGLALKMSPWASGGHFMSTAEKIRLPDDCTIGYII
ESVLGVKLIRSNLFHSHLENLHQVPKTEIHKQVTLSYGMFENKRNSIHMKGAFSADEDPS
RFRSIHCLLYPDTPWCPLNVVY
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagagctgcggaaggaaactgctcttgttcctggtcgggtgcatgttcacctgc
ctcttggtcctgatggcggatcagcagaagcggcaggtggaggacctgggaggagaaggg
ggcaggcgagctttgcagagcttggcgagcccgggcgagccgaagggcctgccccgccag
ccgcagctgcaggagggcgagcccggcttggccccccgagaagtgaagagcttcaccgat
tacttcagcaagctgagccgaggcaggcgggaggcgcaggacgccggcagcctggccccg
agccgggaggggaccccgaggccggccctggaggacatcaccgcccaggatgtcttcatc
gcggtgaagaccaccaagaagttccacaaggccaggctggagctgctgctggacacctgg
atctcccggaacagagacttgaccttcatcttcaccgatggggaggatgaggaactgaag
aaacgcacagccaatgtcatcaacaccaactgttccgccgcccacagccgccaggctttg
tcttgcaagatggccgtggaatacgacaagttcatcgagtccgggagaaagtggttttgc
catgtggatgatgataactatgtgaatgtccggaccctggtgaagttgctgtctggctac
ccccacacacaggacatctacatcggcaaacctagtctggaccgacccattcaagccaca
gagaggatcagtgagaacaagatgcatcctgttcatttctggtttgccactgggggagca
ggtttctgtattagtcgcgggctggcgctgaagatgagcccgtgggcgagtgggggtcat
ttcatgagcacagcagagaagatccgcctgccagatgactgcaccatcgggtacatcata
gagtccgtgctaggagtgaagcttatccggagtaatctcttccactcccacctggagaac
ctccaccaggtgcccaagacagaaattcacaaacaggtgacgctgagctatggcatgttt
gaaaacaagaggaattccatccatatgaagggagctttctccgctgatgaggatccatcc
aggttccgctccattcactgcttgctgtacccagacacgccatggtgccccctgaatgtg
gtgtactag
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