Emys orbicularis (European pond turtle): 135895416
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Entry
135895416 CDS
T11511
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
KO
K02084
apoptotic protease-activating factor
Organism
eob Emys orbicularis (European pond turtle)
Pathway
eob04115
p53 signaling pathway
eob04210
Apoptosis
eob05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
eob00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
135895416 (APAF1)
04115 p53 signaling pathway
135895416 (APAF1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135895416 (APAF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
APAF1_C
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_Gbeta
WHD_APAF1
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
NB-ARC
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
NBCH_WD40
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
CARD
CFAP251_N
WD40_MABP1-WDR62_1st
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_Aladin
DSE1_N
Beta-prop_WDR19_1st
WD40_like
Beta-prop_NOL10_N
Beta-prop_Vps41
Beta-prop_VPS8
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
ASA1
Beta-prop_HPS5
eIF2A
Beta-prop_DCAF4
Beta-prop_NWD2_C
Beta-prop_NUP159_NUP214
CARD_2
PEP5_VPS11_N
TRM82_WD
UCP007778
Beta-prop_ACSF4
Beta-prop_IFT140_2nd
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_WDR11_2nd
Beta-prop_Nup120_160
AAA_16
nSTAND6
PAC11
AAA_22
ATPase_2
Motif
Other DBs
NCBI-GeneID:
135895416
NCBI-ProteinID:
XP_065279596
LinkDB
All DBs
Position
1:89340097..89411624
Genome browser
AA seq
1252 aa
AA seq
DB search
MDVKSRNHLLLNHEALIRDIKTSYIMDHMIADEVLTLQEEEKVKAQTTQKERAAMLIKII
LAKDNYSYISFYNALLHEGYKDLAALLQDAIPIISSCNGNKSMDGVTSYVRTVLCEGGVP
QRPVVFVTRPKLVKAIQQKLYNLRNEPGWVTVYGMAGCGKSVLTAEALQDHHLLEDCFPG
GVHWVSVGKQDKAGLLMKLQNLCSRLDQDFSLSQRPPLNIEEAKDRLRLLILRKYPRCLM
VLDDIWDSWVLKAFDNQCQVLITSRDRSVTDSVTGNKYEIPVESGLAHDKGLEILSLFVN
MKITDLPEEADSIVGECKGSPLVVSLIGALLRDFPNRWEYYLRQLQNKQFKRIRKSSSYD
YEALDEAMSMSVEMLNENFKDYYKDLSVLQKDVKVPTKVLCILWDMETEEVEDILQEFVN
KSLLFCDRNGKSFHYYLHDLQLDFLTEKNRDQLQELHKKIVNQYKKHYKLHIPTPAQEDC
MYWYNFLAYHMASATMQNELCALMFSLDWIKAKTELVGPAHLIHEYVEYSHILDQKDSIV
RENFQEFLSLNGHLLGRKPFPNIIQLGLCQPETSEVYQQAKLQAQQELVKGAFYLEWINK
KSMKNLSRLVVRPHTDAVYHACFSKDGQRIASCGADKTLQVFKAKSGEKLLEIKAHDDEV
LCCAFSADDRFVATCSVDKKVKIWNSRTGQLVQVYEEHGEQVNCCQFNNTNDQLLLATCS
NDTYIKLWDLNKKHCRNTMFGHLNSVSHCRFSPDDKYVASCSADGTLKLWEVCSANELKT
IDIKDFFRNADEHQDDVEVLVKCCSWSANCATIMVAAKNRLLLLDVITSDLLAEVLISHH
STIQYCDFCPGNQLVTVALSHYSVELWNTESFLKVADCRGHLSWVHCVTFSPDGSLFLTS
SDDQTIRIWESSKVCKSSAVVLKRELDVVFQDDEVMVLAILNQKHLQLINGNTGHTDYLT
EAQESLICCCCLSEDLQYAAFGEENGTVKVLKLSNKRVFKSRTGHEKSVQHCQFTSDGQT
LISSSDDSTIQVWNWQSEEYIFLKGHKEAVKNFRLLENSRLLSWSFDGTVKVWNICTGKI
EEDFVCHEDAVLSCAISPDATKFSSTSADKTAKIWSFESSSVLHELNGHKGCVRCCTFSF
DNKFLATGDDNGEIRIWDVSRGELLHLCSPVTVDEGESTHGGWVTDLCFSPESNMLVSCG
GYLKWWNVTTGESLQTFYTNGTNLKSIYVSPSFKVYVTIDNLGILYVLQMLE
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaaatctcgaaatcatttgcttctgaatcatgaagcattgataagagacatc
aagacctcttacattatggatcatatgattgctgatgaagtactaacattacaggaggag
gagaaagtaaaagcacagactacacagaaagaacgagctgctatgctaataaaaattatt
cttgcaaaagataattattcatacatatccttctataacgcactgcttcatgaagggtac
aaagacctggctgctcttcttcaggatgcgatccctattatctcctcttgtaatggaaat
aagtctatggatggagttacttcgtatgtgagaacagtcctctgtgaaggtggagtacca
caaagaccagttgtatttgttactcgtccaaagctggtaaaagcaattcaacagaaactg
tacaacttaagaaatgaaccaggttgggttactgtttatggaatggcaggttgtgggaag
tctgttttaacagcagaagcactacaggatcaccatctcttggaagattgcttcccagga
ggagtacattgggtttctgttggaaaacaagacaaggcagggctcctaatgaaactccag
aatctttgtagtagactagaccaggacttctctctttcacaaaggccaccgcttaatatt
gaggaggctaaagatcgccttcgtctgctgatactacgcaaataccccaggtgtctcatg
gttctggatgacatttgggattcatgggtattaaaagcttttgataatcaatgtcaagtt
cttattactagtagggataggagtgtgacagactcggtgactggcaataagtatgaaatt
cctgtggagagtggattagcacatgacaaaggacttgagattttatctctgtttgttaat
atgaaaataacagatctgccagaagaggctgatagtattgtaggggaatgcaaaggttcg
cctcttgtagtgtcattgataggtgcattattacgagatttccctaatcgttgggaatat
tacctcagacagctgcagaataagcaatttaaaagaataaggaaatcatcatcttatgat
tatgaagcacttgatgaagccatgtccatgagtgttgaaatgttaaatgaaaattttaaa
gattattataaagatctttctgtccttcaaaaggatgttaaggtgccaactaaggtgctt
tgtattctttgggatatggagactgaagaagtggaagatatactgcaagaatttgttaat
aaatctctcttattttgtgatcgtaatgggaagtcattccattattatttgcatgatctt
caacttgactttctcacagagaagaatcgcgatcagcttcaggagctgcataaaaagata
gtaaatcagtacaagaaacattataaactacatatacctactccagctcaagaggactgt
atgtactggtataactttctagcataccacatggctagtgccaccatgcagaatgaactt
tgtgctctcatgttttctctagattggataaaagcaaaaacagagttggtagggcctgcc
catttgattcatgaatatgtagaatatagccatatattggatcagaaggatagcatagta
cgtgaaaactttcaggaatttctgtctttaaatggacaccttcttggaaggaagccgttt
cctaacatcatacagttagggctgtgtcaaccagagacttcagaagtgtatcaacaagcc
aaactgcaagctcagcaagaacttgttaaaggagcattttacctggaatggataaataaa
aaatccatgaagaacctctcccgtttggttgtccgtccccatacagatgcagtttaccat
gcctgcttttccaaggatggacagagaatagcttcttgtggcgctgataaaaccttacag
gtgtttaaagcgaaaagtggagagaagcttttggaaataaaggctcatgatgatgaagta
ctttgttgcgctttctctgcagatgacagatttgtagcaacttgttcagtggataaaaaa
gttaagatctggaactcaagaacaggtcagcttgtacaggtatacgaagaacatggagaa
caggtcaactgctgccagtttaataacacaaatgatcaacttctcttagccacctgctca
aatgatacttatatcaaactttgggatttgaacaaaaagcattgtcgaaatacaatgttt
ggtcacttaaattcagtcagccactgcagattttcaccagatgacaaatatgtggctagt
tgctcagcagatggaacattaaagctttgggaagtgtgttcagcaaatgaactgaaaact
attgatataaaagacttcttcagaaatgcagatgaacaccaagatgatgtggaagtgtta
gtgaagtgttgctcctggtcagcaaattgtgctacaataatggtggcagccaaaaatcgg
cttttacttcttgatgttataaccagtgacttgttagcagaagtccttataagtcaccac
agtacaatccagtactgtgacttttgtcctggcaatcagttggtaacagttgctttatca
cattattctgttgagttatggaatacagaatcctttttaaaagtagctgattgcagagga
catctgagttgggttcactgtgtgacattttctcctgatggatctttatttctgacatcg
tcggatgaccagacaataaggatttgggagtcaagtaaggtgtgcaagtcctctgctgtt
gtgttaaaacgtgaactagatgttgtgttccaggatgatgaagtgatggttttagcaatt
ctcaatcagaaacatctacaactaattaatggaaatacaggccatactgactatctgact
gaagcccaggaatctcttatttgctgctgttgcctaagtgaagatcttcaatatgcagca
tttggagaggagaatggaacagtaaaggttttgaaattgtcaaataagagagttttcaaa
tccaggactggacatgagaaatctgtacaacattgccagtttacatctgatggacaaacc
cttatttcaagctctgatgattcaactatacaggtgtggaattggcagtcagaagaatat
atatttttaaaaggtcacaaggaagcagtgaagaattttaggcttttggaaaattcaaga
cttctttcctggtcatttgatggaacagttaaggtgtggaatatttgtactggaaaaata
gaagaagattttgtttgccatgaagatgctgttctttcttgtgctatttcacctgatgcc
accaagttttcatctacctctgctgacaaaactgccaagatatggagctttgaaagttca
tctgttcttcatgagcttaatggtcacaaaggctgcgtgcggtgctgcactttctccttc
gataacaaattcttggccactggagacgacaatggagaaataaggatttgggatgtctca
agaggtgaattacttcatctctgctcccctgttactgtagatgaaggagaatcaacacat
ggtggctgggtaacagatctctgtttttctcctgagagtaatatgcttgtgtcatgtgga
ggatatcttaagtggtggaatgtaactactggagaatccttacaaacattctacacaaat
ggaacaaacctcaagtcaatatatgtgtcccctagtttcaaagtatatgtgaccattgat
aatcttggtattctttatgtgctacagatgctggaataa
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