KEGG   Escherichia coli O7 K1 CE10: CE10_1209
Entry
CE10_1209         CDS       T01999                                 
Symbol
ycfD
Name
(GenBank) conserved protein
  KO
K18850  50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
Organism
eoc  Escherichia coli O7:K1 CE10
Brite
KEGG Orthology (KO) [BR:eoc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:eoc03009]
    CE10_1209 (ycfD)
Enzymes [BR:eoc01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.47  [50S ribosomal protein L16]-arginine 3-hydroxylase
     CE10_1209 (ycfD)
Ribosome biogenesis [BR:eoc03009]
 Prokaryotic type
  ribosomal protein modification factors
   CE10_1209 (ycfD)
SSDB
Motif
Pfam: JmjC_2 WHD_ROXA Cupin_1 Cupin_2 AraC_binding Tup_N
Other DBs
NCBI-ProteinID: AEQ12029
LinkDB
Position
complement(1259090..1260211)
AA seq 373 aa
MEYQLTLNWPDFLERHWQKRPVVLKRGFNNFIDPISPDELAGLAMESEVDSRLVSHQDGK
WQVSHGPFESYDHLGETNWSLLVQAVNHWHEPTAALMRPFRELPDWRIDDLMISFSVPGG
GVGPHLDQYDVFIIQGTGRRRWRVGEKLQMKQHCPHPDLLQVDPFEAIIDEELEPGDILY
IPPGFPHEGYALENAMNYSVGFRAPNTRELISGFADYVLQRELGGNYYSDPDVPPRAHPA
DVLPQEMDKLREMMLELINQPEHFKQWFGEFISQSRHELDIAPPEPPYQPDEIYDALKQG
DVLVRLGGLRVLRIGDDVYANGEKIDSPHRPALDALASNIALTAENFGDALEDPSFLAML
AALVNSGYWFFEG
NT seq 1122 nt   +upstreamnt  +downstreamnt
atggaataccaactcactcttaactggcccgattttcttgaacgtcactggcagaaacgc
ccggtggtgttaaaacgcggctttaataattttattgacccgatctctccagacgagttg
gcgggtctggcgatggaaagcgaagtcgacagtcgactggtcagtcatcaggatggcaaa
tggcaggtcagccacggtccattcgaaagctacgatcatctcggtgaaactaactggtca
ttgttagtgcaagcagtgaaccactggcatgagccgaccgccgcgctaatgcgaccgttc
cgtgaactaccggactggcgtattgatgatctgatgatctctttttctgtaccgggcggc
ggcgtcggcccgcatctcgatcagtacgacgtgtttatcattcagggtaccggtcgtcgt
cgctggcgagtgggtgaaaagctgcaaatgaaacagcactgcccacatccggatctgtta
caggtcgatccgttcgaagccatcatcgatgaagagctggagcctggtgatattctttat
attccgccaggattcccgcatgaaggctacgcgctggaaaatgcgatgaactattccgtg
ggttttcgcgcgccaaatacgcgggaactgattagtggatttgccgattatgtgctgcaa
cgtgaactgggcggcaactactacagcgatcctgatgttccacctcgcgctcatcctgcg
gacgttctgccgcaagagatggataaactgcgtgagatgatgctcgaattgatcaaccag
ccggaacactttaagcaatggtttggcgagtttatatcccagtcacgtcatgaactggat
atcgcgccgccagagccgccttatcagccggatgaaatctacgatgcgctgaaacaaggt
gatgtgctggtgcgcctggggggtctgcgcgtattgcgcattggcgacgacgtgtatgcc
aatggtgagaagatcgattccccgcaccgtccggcactggatgcgctcgccagcaacatt
gcgctgaccgcggagaattttggcgatgcgctggaagatccgtcattcctcgcgatgctc
gcggcgctggtcaatagcggatactggttcttcgaagggtaa

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