Escherichia coli O111 H- 11128 (EHEC): ECO111_2103
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Entry
ECO111_2103 CDS
T01097
Symbol
nth
Name
(GenBank) DNA glycosylase and apyrimidinic (AP) lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
eoi
Escherichia coli O111:H- 11128 (EHEC)
Pathway
eoi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ECO111_2103 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eoi03400
]
ECO111_2103 (nth)
Enzymes [BR:
eoi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ECO111_2103 (nth)
DNA repair and recombination proteins [BR:
eoi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ECO111_2103 (nth)
Prokaryotic type
ECO111_2103 (nth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BAI35976
LinkDB
All DBs
Position
2107452..2108087
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AA seq
211 aa
AA seq
DB search
MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT
PAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGLVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI
LHGRYTCIARKPRCGSCIIEDLCEYKEKVDI
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcaaaacgcctggagatcctcactcgcctgcgtgagaacaatcctcatccc
accaccgagcttaatttcagttcgccttttgaattgctgattgccgtactgctttccgct
caggcgaccgatgtcagtgttaataaggcgacggcgaaactctacccggtggcgaatacg
cctgcagcgatgcttgaactgggcgttgaaggggttaaaacctatatcaaaacgattggg
ctttataacagcaaagcagaaaatatcatcaaaacctgccgtatcttactggagcagcat
aatggcttggttccggaagatcgtgctgcgcttgaagccctgcccggcgtaggtcgtaaa
acagccaacgtcgtattaaacactgcattcggctggccgactattgctgtcgacacgcac
attttccgcgtttgtaatcgtactcaatttgcgccggggaaaaatgtcgaacaggtagaa
gaaaagctactaaaagtggttccggcagagtttaaagtcgactgccaccattggttgatc
ctgcacgggcgttatacctgcattgcccgcaagccccgctgtggctcttgtattattgaa
gatctttgtgaatacaaagagaaagttgacatctga
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