Edaphobacter paludis: P4G45_06620
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Entry
P4G45_06620 CDS
T10404
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
epl Edaphobacter paludis
Pathway
epl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
epl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P4G45_06620 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
epl03400
]
P4G45_06620 (nth)
Enzymes [BR:
epl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
P4G45_06620 (nth)
DNA repair and recombination proteins [BR:
epl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
P4G45_06620 (nth)
Prokaryotic type
P4G45_06620 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
BEN
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
XBH11390
UniProt:
A0AAU7D9Y0
LinkDB
All DBs
Position
complement(1615889..1616662)
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AA seq
257 aa
AA seq
DB search
MPRTKTTTVVKPVQQSPVGMKARAIAATESASPKKKLGKTANPLDPKRVTAILEVLEKTY
PGVVCALNHRNAWELTVATILSAQCTDVRVNLVTPALFKAFPTPKAMAAASLPELEELIR
TTGFYRNKAKSIKGAAKAVVEEFGGKVPQTMEELLRLPGVARKTANVVLGSWFRIAVGVV
VDTHVMRLTRRLELTNETAPEKVERDMMKIIPKDHWIAFSHELIHHGRQICIARKPKCVD
CTLEKLCNSSDKTWTSH
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggactaagacgacgacagtagtgaaaccggtgcagcaatcgcccgtgggaatg
aaggcacgggcgattgctgcaaccgaatctgcatctccgaagaagaagctcggcaagacg
gcaaaccctctcgacccaaagcgcgtcaccgcaattctggaggtgctggagaagacctac
cccggtgtagtctgcgctctgaaccatcgcaatgcctgggagttaacggtggccacgatc
ctttctgcacagtgtacggacgtgcgcgtgaacctcgtcacgcctgccctgttcaaggca
ttccccacgccgaaggcaatggcagctgcctctctcccggaactggaagagttgatccgc
acaaccggcttctatcgcaataaggccaagtccataaagggcgcggccaaggcagtggtc
gaggagttcggtggtaaagtcccccagaccatggaagagctactgcgcttgcccggcgta
gctcgcaagaccgccaatgtagtcctcgggtcatggtttaggattgccgtcggagttgtt
gtagatacgcatgttatgcgtctcactcgacgactggagctaaccaatgagaccgcgcct
gagaaggtcgaacgggacatgatgaagatcatccccaaggaccattggattgccttctcc
catgagctaatccatcatggacggcagatttgcatcgcgcgtaagccaaagtgcgtcgat
tgcacgcttgaaaagttatgcaattcctcggacaagacatggacgtctcactaa
DBGET
integrated database retrieval system
