KEGG   Elusimicrobium posterum: Dip510_000964
Entry
Dip510_000964     CDS       T10993                                 
Name
(GenBank) DNA ligase (NAD+)
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
epm  Elusimicrobium posterum
Pathway
epm03030  DNA replication
epm03410  Base excision repair
epm03420  Nucleotide excision repair
epm03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:epm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Dip510_000964
   03410 Base excision repair
    Dip510_000964
   03420 Nucleotide excision repair
    Dip510_000964
   03430 Mismatch repair
    Dip510_000964
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:epm03032]
    Dip510_000964
   03400 DNA repair and recombination proteins [BR:epm03400]
    Dip510_000964
Enzymes [BR:epm01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     Dip510_000964
DNA replication proteins [BR:epm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Dip510_000964
DNA repair and recombination proteins [BR:epm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     Dip510_000964
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Dip510_000964
   MMR (mismatch excision repair)
    DNA ligase
     Dip510_000964
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Dip510_000964
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD Nlig-Ia PTCB-BRCT HHH_5 HHH Auto_anti-p27
Other DBs
NCBI-ProteinID: XRK15323
LinkDB
Position
complement(979230..981203)
AA seq 657 aa
MDKKTQSEIEELRRLINYHNELYYNQDNPEISDTEYDQLYSRLKTLEALNPDVAGEASPT
QKVGGAASSRFKPAVHAAPMLSLDNTYNPDEILRWHERCAKTLGYNDFDMVAEAKIDGVS
CSLTYENGVFTVGATRGDGKTGEDVTANIKTIKTIPHTIGFLGKIEIRGEVYINKKALEQ
LNKEQSAKELNIFANARNAAAGSIRQKDASISASRPLKFFAHSYGFGNIEEKSYSKFMAD
CKEWGFDICPERIQTKNIEDVINFYKSFDEKRHTLDYDVDGLVVKTDNFREQNILGVTSK
SPRWSVAFKYPAPQATTKINNIIFSVGRTGVITPVAELEPVGVAGVVISNATLHNFDEIE
RLNVGIGDTVLIERAGEVIPKVIKVVKKEENNKVALPTNCPSCNAPLYKDEEEVALRCIN
PSCPAQIKGHLLHFVSRAAMDIDGMGEAVIDQLLAKNYIKTVPDIYKINKDMLMTLELFK
DKKAANLLTAIENSKAQPLNRLIYALGIRHTGEKTSELLAERFTNIDNILEAKLEDFESI
SEIGPIMAASLYTFFTTEKAKEEIAQLREAGLNMTQPERIRTGAKLEGKTLVFTGELSMP
RSQAEAMAKENGAKTSGSVSSKTSYVVAGADAGSKLKKAQDLGVTVLTEEEFLNLIK
NT seq 1974 nt   +upstreamnt  +downstreamnt
atggacaaaaaaactcaatccgaaattgaagaattaagacgtttaataaactaccataac
gagctttactacaatcaggacaacccagaaatttccgatacggaatatgaccagctttac
tcacgcttaaaaactttagaagccttaaatcctgatgtagcgggggaggcatcccccacg
caaaaagtgggcggcgcggccagttcccgctttaaaccagccgtgcacgcggcccccatg
ctttctttagacaacacttataatccggatgaaattttacgctggcatgaacgctgcgca
aaaaccttaggctacaatgattttgatatggttgcagaagccaaaatagacggcgtttcc
tgctcacttacttatgaaaacggcgtttttaccgtcggcgcaacgcgcggtgacggcaaa
acgggtgaggatgttacggcaaacataaaaacaataaaaaccattccgcatacaatagga
tttttaggcaaaattgaaatacgcggtgaggtttacataaataaaaaagctttagaacaa
cttaacaaagaacaaagcgcaaaagagcttaatatttttgccaacgcgcgcaacgcggcg
gcgggctccatacgtcagaaagacgcgtcaatttccgcttccaggccgctcaaatttttt
gcccattcttacggttttggcaatattgaagaaaaaagttattccaaatttatggctgac
tgtaaagaatggggctttgatatttgcccggaaagaatacagacaaaaaatattgaagac
gttataaatttctacaaatcctttgacgaaaaacgccatacgcttgattatgacgttgac
ggcctggttgttaaaactgataactttagagagcaaaatattttgggcgtaacctcaaaa
agtccgcgctggtcagtagcgtttaaataccccgcgccgcaggctacaacaaaaatcaat
aacatcattttttccgtcggcagaacgggcgttataactccggtggcggagctggaaccg
gttggcgtggcgggcgtggttatctcaaacgcaacgcttcataattttgatgaaattgaa
aggctcaacgtcggaataggcgatactgttttaatagagcgcgccggtgaagttatccca
aaagttataaaagttgttaagaaagaagagaataataaagttgctctacccaccaactgc
ccgtcgtgcaacgcgccgctttataaggatgaggaggaagttgcgctgcgctgtattaac
ccttcctgcccggcgcagattaaggggcatttactgcattttgtttcccgcgccgctatg
gatatcgacggtatgggtgaggcggttatagaccagctgcttgcaaaaaattatattaaa
accgtgcccgatatttacaaaattaataaagatatgctgatgacgctggagctttttaaa
gacaaaaaagcagccaatcttctgacggcaatagagaacagcaaagcccagccgcttaac
cgtttaatttacgctcttggcatacgccacacgggtgaaaaaacttctgaacttttggcg
gaacgctttacaaatattgataatattttagaagcaaaacttgaagattttgaatctatt
tcagaaataggccccattatggccgccagtctttacacgttttttacgacggaaaaagct
aaagaagaaattgcgcagctgcgcgaagcgggccttaatatgacacagcctgaaagaata
agaacaggcgcgaaattagaaggcaaaactttggtttttacaggtgagctttccatgccg
cgcagccaggccgaagccatggctaaagaaaacggcgcaaagacctccggcagcgtatca
tccaagacttcttacgtcgtggcgggggcggacgcgggcagtaaacttaaaaaagcgcag
gatttgggcgtaacagttcttacggaagaagaatttttaaatttaataaaataa

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