Enterobacter pseudoroggenkampii: QVH39_00445 Help Entry QVH39_00445       CDS       T09244                                  Symbol ligB Name (GenBank) NAD-dependent DNA ligase LigB   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism epu  Enterobacter pseudoroggenkampii Pathway epu03030   DNA replication epu03410   Base excision repair epu03420   Nucleotide excision repair epu03430   Mismatch repair Brite KEGG Orthology (KO) [BR:epu00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     QVH39_00445 (ligB)    03410 Base excision repair     QVH39_00445 (ligB)    03420 Nucleotide excision repair     QVH39_00445 (ligB)    03430 Mismatch repair     QVH39_00445 (ligB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:epu03032]     QVH39_00445 (ligB)    03400 DNA repair and recombination proteins [BR:epu03400]     QVH39_00445 (ligB) Enzymes [BR:epu01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      QVH39_00445 (ligB) DNA replication proteins [BR:epu03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      QVH39_00445 (ligB) DNA repair and recombination proteins [BR:epu03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      QVH39_00445 (ligB)    NER (nucleotide excision repair)     GGR (global genome repair) factors      QVH39_00445 (ligB)    MMR (mismatch excision repair)     DNA ligase      QVH39_00445 (ligB)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       QVH39_00445 (ligB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB RNA_ligase DUF3701 Motif Other DBs NCBI-ProteinID:  WJW86145 LinkDB All DBs Position 101325..102995 Genome browser AA seq 556 aa AA seqDB search MWRWISGLMLLWCGYGAAMCPVWSQAKAEKEMASLSAQIKRWDEAYWKQGVSEINDEVYD QLHGRLTQWQRCFGSEPSEEKLPALTGSVKHPVAHTGVHKVASKEELRQWMRARQHLWLQ PKVDGVAVTLVYRDGKLTQAISRGDGLKGEDWTGKVRLVPSVPQKLTGKLANSVLQGELF WLRDNHIQQQMGGMNARAKVAGAMMRQKDNSLLSKIGVFIWAWPDGPKDMQTSLAELSQA GFTLSARYTLPAESVDGVEKQRATWHATALPFATDGIVVRSEDEPAGEDWLPGEGNWVVA WKYAPTAQVAEVSHIHFSVGRTGKISVVATLEPVQLDDKQVQRVSLGSVGRWQILDIAPG DQIQISLAGQGIPRFDKVLWRGTDRHKPEPPASRYHALSCFYASPECMEQFFARLTWLSS KQVLDIEGLGESGWRTLWQAHHFEHLFSWLLLTQAQLQSTPGFSSARGLALWHRFNLVRE KPFIRWLMALGVPMTQASLKAMGDISWQKMSGRNAKDWQALPGTGEEKARQIVNWMLAPQ IDVLAKWLAGQHINGF NT seq 1671 nt NT seq  +upstreamnt  +downstreamnt atgtggcgatggataagcgggttaatgctgttgtggtgcggttatggcgcggcgatgtgt ccggtgtggtcgcaggcaaaagcagagaaagagatggcgtcgttaagcgcgcaaatcaaa cgctgggatgaggcttactggaagcagggcgtgagcgagatcaacgacgaggtttacgac cagcttcacgggcgtttaacgcagtggcagcgctgttttggcagtgagccttcagaagag aaactccccgcgctgacggggagcgtaaaacatcctgttgcccacacgggcgtgcataag gtggccagcaaagaggaactgagacagtggatgcgtgcccgacagcatctgtggctgcag ccgaaagttgacggtgtggcggtgacgctggtctatcgtgacgggaagttaacccaggcc atcagtcgcggtgatggcctgaaaggggaagactggaccgggaaggtgcgcttagtcccg tctgttccgcaaaagctcaccggcaagctggcgaacagcgtcttacagggcgaactcttc tggttgcgcgacaaccacattcagcagcagatgggcggaatgaacgctcgtgcaaaggtg gcgggggcgatgatgcggcaaaaggataactcgctattgagcaagatcggcgtattcatc tgggcctggccggacggaccgaaagatatgcagacctctttagctgaactgtctcaggct ggttttacgctgtcggcacggtatacgcttcccgccgaatctgttgatggcgtcgagaaa cagcgcgcgacctggcacgcgaccgcattaccctttgccacggatggcattgtggtgcgt tcggaggatgaacccgcgggcgaagattggttaccgggagaaggcaactgggttgttgcg tggaaatatgcgcctacagcccaggttgctgaggtgagtcatattcatttttccgtgggg cgaacgggcaaaatttccgttgtagcaacgctggaacccgtgcaactggatgataaacag gtgcagcgggtgagcctgggctcggttgggcgctggcagatactggatattgccccgggg gatcagatacagatcagcctggccgggcagggtatcccccggtttgataaagtgctctgg cgcgggacggacagacataaaccagagcctccggcctcgcgttatcatgcgcttagttgt ttctatgcttcgccggagtgtatggagcagttctttgcccggctgacctggctcagttca aagcaggtgcttgatattgaaggattaggcgagtcaggctggcgtaccctctggcaggca catcattttgaacatctcttttcatggctgttattaactcaggcgcagttgcagtcaaca ccggggttttcctcagcacgcgggctggcgctctggcaccgatttaatctggtgcgcgag aagccgtttatccgctggctcatggcattgggtgtgccaatgacgcaggcttcgctgaag gcgatgggagacatatcgtggcagaagatgagcgggcgcaacgcaaaggactggcaggcc ctgccgggaacgggagaggaaaaagcgcgacaaatcgttaactggatgctcgcgcctcag attgatgtgctggcgaaatggctcgctggacagcacatcaacgggttctga

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