Eremothecium cymbalariae: Ecym_1500
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Entry
Ecym_1500 CDS
T02237
Name
(RefSeq) hypothetical protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
erc
Eremothecium cymbalariae
Pathway
erc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
erc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ecym_1500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
erc03019
]
Ecym_1500
Messenger RNA biogenesis [BR:
erc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
Ecym_1500
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_23
SMC_N
AAA_29
RsgA_GTPase
AAA_15
AAA_22
Dynamin_N
AAA_13
Rad17
MMR_HSR1
AAA_18
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
11472943
NCBI-ProteinID:
XP_003644541
UniProt:
G8JMQ9
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All DBs
Position
1:1027467..1028318
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AA seq
283 aa
AA seq
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MHISPPSPTTSQKPDTMTLAVEVRDLTYRFPNAPSDSLTGINLSIPWKTCTLICGSNGAG
KSTLLKLLSGKHLCLTGNIKVDNRDPFAPTNTSANSGLMMTTYLGTEWCHMSIINRDIGV
QELLESIGLQYYKERGLSLIKILGVDLCWRMHQLSDGQKRRVQLCMGLLKPFKVLLLDEV
TVDLDVVARAQLLKFLQLETESRNCSVIYATHIFDGLSTWPNRIIHLAKGQIFHDLMYTD
DIEFTQHSDTDDIVKKTDHKFKIAKTKSLHPLALSWLSHDEGK
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgcatatatctccaccaagccccaccacttcacagaagcctgacaccatgactcttgcc
gttgaagtgagagacttgacttaccggttccccaatgctcccagtgactctctaactgga
attaacctatcaattccgtggaagacctgtaccctcatatgtggttctaacggtgctggt
aagtccacattgctcaagcttctgagtggcaaacatctgtgccttactggcaacatcaaa
gttgacaaccgtgatcccttcgccccaaccaacacatcagcaaacagcggcctgatgatg
accacctatctgggcaccgagtggtgccacatgagcatcatcaaccgcgacattggagtc
caagaattgctggaaagcatcggtctacagtactacaaggaaagaggactgagccttata
aaaattctaggtgtagacctctgctggcgtatgcaccaactcagcgatggccagaaaaga
cgtgtgcagctatgcatgggcctactgaagccattcaaggtcctcctactggatgaagta
acagtagacctcgacgtcgtagccagagcacagcttcttaaattcctacagctcgaaaca
gaatcccgcaactgcagcgtcatctacgcaacccacatctttgatggcctctccacctgg
cctaacagaataattcatctcgctaaaggtcaaatttttcacgatctcatgtacacagat
gatatcgaatttactcagcactcagacacggacgatatcgtgaaaaaaaccgaccacaaa
ttcaagatagcgaaaactaaaagcctccacccattggccctatcatggctctctcacgat
gaagggaaatag
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