Erythrobacter sp. THAF29: FIU90_03600
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Entry
FIU90_03600 CDS
T06318
Symbol
pdg
Name
(GenBank) Ultraviolet N-glycosylase/AP lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
erf
Erythrobacter sp. THAF29
Pathway
erf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
erf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FIU90_03600 (pdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erf03400
]
FIU90_03600 (pdg)
Enzymes [BR:
erf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FIU90_03600 (pdg)
DNA repair and recombination proteins [BR:
erf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FIU90_03600 (pdg)
Prokaryotic type
FIU90_03600 (pdg)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
QFT76623
UniProt:
A0A5P9GS51
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All DBs
Position
717630..718346
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AA seq
238 aa
AA seq
DB search
MAQLPFGSDPRTDILRRVQEALIERFGRIVRPPEKRRPPEWVLVHGVIGAQTKTAASNAS
TDALLAEYGSWEAVAAAPVEQLEARLQRQTFPSVAAKRLKDCLTAIIEARGAVDLRHLSN
LETADAMAWLETLPGVARKNSAGVMNASTFNRRAMVIDGHHRRIIQRMGLVPAKADTAKT
YNALMPIVPDEWSAEDMDEHHLLLKKLGQTYCRPRRAQCDGCPVRRDCKTGTSSSSAR
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcttcccttcggctccgacccgcgcaccgacattctccgccgggtgcaagag
gcgttgatcgaacggtttgggcgtatcgtccgtccgccggaaaagcggcgtccacccgaa
tgggtgctggttcacggggtgatcggcgcgcagacgaaaaccgccgcctccaacgcctcg
accgatgcgctgctcgcagaatacggatcgtgggaggcggtcgcagcggctccggtggag
cagctcgaagcgcggctccagcggcagacctttccgagcgtcgctgccaagcggctgaag
gattgcctcaccgccattatcgaggcgcggggcgcagtagacttgcgtcacctctccaat
ctcgaaaccgccgatgcgatggcatggctcgaaacgcttccgggcgtcgcgcgcaagaac
tcggcaggggtgatgaacgccagcactttcaaccgacgcgcgatggtgatcgacggccac
catcgccgtatcattcagcgcatgggcttggtccccgccaaggccgacactgcgaaaacc
tataacgcgctgatgccgatcgtgccggacgaatggtccgccgaagacatggacgaacac
cacctgctgctgaaaaagctcggccagacctattgtcgcccgcgcagggcgcagtgcgat
ggctgtccggtgcgcagggactgcaagaccggaacctcaagctcctccgctcgctga
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