Erysipelothrix larvae: AOC36_01120
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Entry
AOC36_01120 CDS
T04263
Symbol
ligA
Name
(GenBank) aromatic ring-opening dioxygenase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
erl
Erysipelothrix larvae
Pathway
erl03030
DNA replication
erl03410
Base excision repair
erl03420
Nucleotide excision repair
erl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
erl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AOC36_01120 (ligA)
03410 Base excision repair
AOC36_01120 (ligA)
03420 Nucleotide excision repair
AOC36_01120 (ligA)
03430 Mismatch repair
AOC36_01120 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
erl03032
]
AOC36_01120 (ligA)
03400 DNA repair and recombination proteins [BR:
erl03400
]
AOC36_01120 (ligA)
Enzymes [BR:
erl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
AOC36_01120 (ligA)
DNA replication proteins [BR:
erl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AOC36_01120 (ligA)
DNA repair and recombination proteins [BR:
erl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
AOC36_01120 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AOC36_01120 (ligA)
MMR (mismatch excision repair)
DNA ligase
AOC36_01120 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AOC36_01120 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
Nlig-Ia
PTCB-BRCT
BRCT_2
RNA_ligase
HHH
Nlrc4-like_WHD
Motif
Other DBs
NCBI-ProteinID:
AMC92643
UniProt:
A0A109UGJ4
LinkDB
All DBs
Position
228610..230589
Genome browser
AA seq
659 aa
AA seq
DB search
MSLDRLQELRQLLQRYNTEYHVLDAPTISDVAYDALYQELLELEAQYPEYYDQNSITQKV
GGVVLDRFHKVTHKHAMYSLGNAFNEEDLRAFDRRIRNQFPQVSYVVELKIDGLAMSLDY
DEGQYVQAVTRGDGSVGEDVTSNVRVINSVPLSLNQTETLTLRGEVFMPIASFTRVNERR
QEAHEQVFANPRNAASGTIRQLDSKVVAGRGLDAFWYTLVDAQNFGVTSQYEALKTLKSL
GFKVNPEIRVCDTMDDVIARIHEIETFRYDLDYEIDGVVIKVNEFDIQEALGFTVRIPRF
AIAYKFKAQEVESVVEDIFITVGRTGKMTPNARLKPVEISGSVVQYATLHNQDYITRKDI
RVHDTVLVRKAGEIIPEIVQVDITKRTEACVSYDFPKVCPVCGGNAMRFGDEADTYCVNA
DCPAQIVQSLSHFASRDAMNIDTLGERRVEQLHSAGLINTIPEIYTLYEKVDRLIILDKM
GKKSATKLLSAIEDSKSNSLEKLIFGLGIRHVGEKTAHVLAMYAKTMDTLMQARFEDLME
LNDIGDVIAQSVVSFFEDDHNHLLIQALKDAGLNMEYQDKTTSNKFAGLKFVLTGTMAQY
DRKQAQALIESMGGSVSGSVSSKTDVVVYGESAGSKLVKAQSLNVETWDEARFIQEVTS
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgagtttagatcgactacaagaactacgacaattattacagcgttacaacacagagtat
catgtgttggatgcacccacgatatctgatgttgcatatgatgcattgtatcaagaattg
ttggagcttgaagcacagtatccagagtactatgatcaaaactcaattacacaaaaagtt
gggggagttgttttagatcgatttcataaggtaacccataagcatgcaatgtattctttg
ggaaatgcatttaatgaggaagatttaagagcttttgatcgacgaattcgaaatcagttt
ccacaggtaagctatgttgtggaattaaaaatagatggtctggcaatgtccctggattat
gatgagggtcaatatgtccaagccgtgacacgtggggatggttcagtgggtgaagatgta
acctcaaatgtacgggtgattaactctgtaccactctcactcaatcaaacagaaaccctt
accttacgtggtgaagtgtttatgccaattgcttcatttacacgcgtgaatgagcgccgt
caagaggcacacgaacaagtctttgcgaatccacgcaatgcagcgtcagggaccattcgt
cagttggattcaaaagttgtagctggacggggcttagatgcattttggtatacacttgtt
gatgcacaaaactttggcgtaacgtctcaatatgaagcgcttaagacactcaagagccta
ggatttaaagtcaatccagagattcgtgtttgtgatacgatggatgacgtcattgcgcgc
attcatgaaattgaaacctttaggtatgaccttgactatgaaattgatggtgtagtgatt
aaggtgaatgaatttgatattcaagaagccctgggattcacagtccgtattccacgattt
gcgattgcgtataagtttaaagcgcaagaagttgaaagtgtagtggaggatatttttatt
acagtgggtcgaaccgggaaaatgacgcccaatgcacgtcttaaacctgtcgaaatatct
ggatcagtggttcaatatgcaacactgcataatcaggactatataacacgcaaagatatt
cgcgtgcatgataccgtactcgtacgaaaagcaggggagattattcctgagattgttcaa
gtggatatcaccaaacgaacagaagcctgtgtatcgtatgatttccctaaagtgtgtcca
gtatgtggtgggaatgcaatgcgttttggtgatgaggcagatacttattgcgtgaatgcc
gattgccctgcgcagattgtgcaatctctcagtcattttgcatcacgcgatgcgatgaac
atcgataccttaggagagcgtcgtgttgaacaattacacagcgctggactcatcaataca
atccctgaaatctatacactctatgaaaaggtagatcgtcttattattttggataaaatg
ggcaagaaatctgcaacaaaattactcagtgcaattgaagatagcaaatcgaattcatta
gaaaagttaatttttggtttaggaattcgccatgttggtgaaaaaacagcacatgttctt
gcaatgtatgcgaaaacgatggatacactgatgcaagcgcgctttgaagatttaatggaa
ttgaacgatataggtgacgtaatcgcccaatctgtggtatcattctttgaagatgaccac
aatcatctgttaattcaagcattaaaggacgcgggtttaaatatggagtaccaggataaa
acaacgtccaataaattcgcaggtctaaaatttgtcttaactggaacaatggctcaatat
gatcgcaagcaagcccaagcattgattgaatcgatgggtggtagtgtgagtggcagtgtg
agcagtaagacagatgttgtagtatatggagaaagtgcgggttcaaagcttgtgaaagct
caaagtctcaatgttgaaacatgggatgaggcacgatttatccaggaggttacgtcatga
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integrated database retrieval system
