Thomasclavelia ramosa: EYR00_03970
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Entry
EYR00_03970 CDS
T06753
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
erm
Thomasclavelia ramosa
Pathway
erm00300
Lysine biosynthesis
erm00550
Peptidoglycan biosynthesis
erm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
erm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EYR00_03970
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EYR00_03970
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
erm01011
]
EYR00_03970
Enzymes [BR:
erm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
EYR00_03970
Peptidoglycan biosynthesis and degradation proteins [BR:
erm01011
]
Precursor biosynthesis
Amino acid ligase
EYR00_03970
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QMW73903
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Position
839434..840900
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AA seq
488 aa
AA seq
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MKRLNELFDTDNDMKIYSIHSDSRYVKPYSIFFCIEGLSVDGHRYVEDAVFQGAKVIVHS
KDLNYYHDKIIYFRVENTLVELNRVSNLFYDCPSNKMKIIGVTGSSGKTVVASMIKDAMA
KYCSSGYIGTISLEYNGRKEECPYTTPEALYLQRKLFEMNRAGVKVVAMEASSHGLALGR
VDGINFNIAVMTNIGAEHLDFHGTKEQYVLAKQKLFEMIKPTGWAILNSDDLNFMTLKNN
TQGRILTYGIEIESDIMAKNIQLHLDHSEFDISFKGNTFHVNSPVIAMFNIYNVLALTGV
LIAMGCDDKMVIDAVENVKPIEGRMELIQTEQQFAVIIDYCQHISNYEAIFEYVDGVRQG
HGRIIAVLGAPGKRNYKLRKELGQLANRYLDHVILTQLDDRGEDVYEICKTIQKEIVDIN
SVIIESRQIAIEQAIEIACKDDIILILGKGHEKFISLDVGQVDYPGDSQIVKEALERIYY
KGEDEDEL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcttaaatgaattgtttgatactgacaacgatatgaaaatctattcaattcat
agtgattcaagatatgtaaaaccttattcgattttcttttgcattgaaggtttaagtgtt
gatggacatcgttatgttgaagatgctgtttttcagggtgcaaaagtaatcgttcattcc
aaagatcttaattattaccatgataagattatttattttcgggttgagaatactttagta
gaacttaatcgtgtttcaaatcttttttatgattgtccaagtaataaaatgaaaattatc
ggagttactggcagcagtggtaagacggtagttgcttcaatgattaaagatgctatggca
aaatattgtagtagtggatatataggaacgatttcattagaatataatggccgtaaagag
gaatgtccttataccactccagaagctctgtatttgcaacgaaaattgtttgaaatgaat
agagctggggtcaaagttgttgcaatggaggcatcaagtcatggtttggctttaggacgt
gttgacgggattaattttaatattgctgtaatgactaatattggggctgaacatttagat
ttccatggaacaaaggaacaatatgttttagctaaacaaaaattatttgaaatgattaaa
ccgacgggatgggcgattttaaatagtgatgatttaaattttatgactttaaaaaataat
acccaaggacgcattttgacttacggaattgaaattgaaagtgatattatggctaaaaat
attcaattacatttagatcatagtgagtttgatatttcatttaaaggaaatacttttcat
gttaattccccagtaatcgcaatgttcaatatttataatgtcttggctttaaccggtgtg
ttgattgctatgggatgtgatgataagatggtcattgatgcagttgaaaatgtaaaaccg
atcgaagggcgaatggaactgattcaaacagaacaacagtttgcagttattattgattat
tgtcaacacattagtaattatgaagctatttttgaatatgttgatggagttcgacaaggg
catgggcgaattattgcggttttaggggctcctgggaagcgtaattacaaattacgtaag
gaacttgggcaattagcgaatcgatacttagatcatgttattttgacacaattggatgat
cgtggtgaagatgtttatgaaatttgtaaaacgattcaaaaagaaattgtcgatattaat
agtgtaattatcgagtcacgtcaaattgcaattgaacaggcaatcgagatagcttgtaaa
gatgacatcattttgattcttggtaagggacatgaaaagttcatttcactcgatgtagga
caagtagattatcctggtgatagccaaattgttaaagaggcacttgaaagaatatattat
aaaggagaagatgaagatgaattataa
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