KEGG   Enterobacter roggenkampii DSM 16690: BFV67_00420
Entry
BFV67_00420       CDS       T05556                                 
Name
(GenBank) DNA ligase B
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
ern  Enterobacter roggenkampii DSM 16690
Pathway
ern03030  DNA replication
ern03410  Base excision repair
ern03420  Nucleotide excision repair
ern03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ern00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BFV67_00420
   03410 Base excision repair
    BFV67_00420
   03420 Nucleotide excision repair
    BFV67_00420
   03430 Mismatch repair
    BFV67_00420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ern03032]
    BFV67_00420
   03400 DNA repair and recombination proteins [BR:ern03400]
    BFV67_00420
Enzymes [BR:ern01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     BFV67_00420
DNA replication proteins [BR:ern03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BFV67_00420
DNA repair and recombination proteins [BR:ern03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     BFV67_00420
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BFV67_00420
   MMR (mismatch excision repair)
    DNA ligase
     BFV67_00420
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BFV67_00420
SSDB
Motif
Pfam: DNA_ligase_aden OB_DNA_ligase DUF3701
Other DBs
NCBI-ProteinID: AOP93715
LinkDB
Position
99600..101270
AA seq 556 aa
MWRWISGLMLLWSGYGAAVCPVWSQAKAEKEMASLSAQIKRWDDAYWKQGVSEVNDEVYD
QLNGRLMQWQHCFGSEPSEEKLPALVGSVKHPVAHTGVHKVASKEELRQWMRARQHLWMQ
PKVDGVAVTLVYRDGTLTQAISRGDGLKGEDWTGKVRLIPTIPQKLTGKLANSVLQGELF
WLSDNHIQRQMGGMNARAKVAGAMMRQKDNSVLSKIGVFIWAWPDGPKDMQTSLAELSQA
GFTLSARYTLPADSVDAVEKQRAAWHVTGLPFATDGIVVRSEDAPAGEGWLPGEGNWLVA
WKYAPAAQVTEVSDIHFSVGRTGKMSVVAALEPVQLDDKQVRRVSLGSVERWQRLDIASG
DQIQVSLAGQGIPRFDKVVWRGTDRHKPEPPASRYHALSCFYASPECMEQFFARLTWLSS
KQVLDIEGLGESGWRTLWQAHHFEHLFSWLLLTQAQMQATPGFSSARGLALWHRFNLVRE
KPFIRWLMALGVPLTQASLKAMGNVTWQTLSGRNAKDWQSLPGTGERKARQIVAFIHDPG
VAGLASWLGKQGLPGF
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgtggcgatggataagcgggttaatgctcttgtggagtggctatggcgcggcggtgtgc
ccggtgtggtcgcaggcaaaagctgagaaagagatggcgtcgttaagcgcgcaaatcaaa
cgctgggatgacgcttactggaagcagggcgtgagcgaggtcaacgacgaagtttacgac
cagcttaacgggcgcttaatgcagtggcagcactgttttggcagtgagccttcagaggag
aaactccctgcgctggtgggaagcgtaaaacatcctgttgcccatacgggcgtacataaa
gtggccagcaaagaggagttgagacagtggatgcgtgcgcggcagcatctgtggatgcag
cccaaagttgacggtgtggcggtaacgctggtctatcgtgacggaacgttaacccaggcc
atcagtcgtggtgatggcctgaaaggggaagactggaccgggaaggtgcgtttgatcccg
actattccgcaaaagctcaccggcaagctcgcgaacagcgtcttacagggcgagcttttc
tggctaagcgacaatcacattcagcggcagatgggcgggatgaacgctcgcgcaaaggtg
gcgggggcgatgatgcggcaaaaggataactcggttttgagcaagatcggcgtgttcatc
tgggcctggccggatgggccgaaagatatgcagacatctttagctgaactgtctcaggcc
ggttttacgctgtcggcacggtatacgctacccgccgattctgttgatgccgtcgagaaa
cagcgcgccgcctggcacgtaaccggattaccctttgccacggatggaattgtggtgcgt
tcggaggatgcgcccgcaggggaaggctggttaccgggcgaaggcaactggctggttgcg
tggaaatatgcgcctgcagcccaggtgaccgaggtgagtgatattcatttttccgtgggg
cgaacgggcaaaatgtccgttgtagccgcactggaacctgtgcaattggacgataaacag
gtacggcgggtgagtctgggctcggtggagcgctggcagaggctggatattgcctcaggg
gatcagatacaggtcagcctggccgggcagggtattccccggtttgataaggtggtctgg
cgcgggacggacagacataaacccgagcctccagcctcgcgttatcatgcgctgagctgt
ttctatgcttctccggaatgtatggaacagttctttgcccgactgacctggctcagctca
aagcaggtacttgatattgaaggattaggcgagtcaggctggcgcaccctctggcaggca
catcattttgaacacctcttttcgtggctgttattaacgcaggcgcaaatgcaggctacg
cctggcttttcctccgcgcgcgggctggcgctctggcatcgatttaatctggtgcgcgag
aagccatttatccgctggctcatggcattgggtgttccgctgacacaggcttcgctgaag
gcgatggggaacgtaacgtggcagacgttgagcggacgtaacgcaaaggactggcaaagc
ctgccgggaacgggagagaggaaggcgcgacaaattgttgccttcatccacgaccctggc
gttgccgggctggcatcctggttaggcaagcagggtctgcctggattttag

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