Erwinia rhapontici: LJN55_05285
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Entry
LJN55_05285 CDS
T08392
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
erp
Erwinia rhapontici
Pathway
erp01501
beta-Lactam resistance
erp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LJN55_05285
01503 Cationic antimicrobial peptide (CAMP) resistance
LJN55_05285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
erp03036
]
LJN55_05285
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
erp02000
]
LJN55_05285
01504 Antimicrobial resistance genes [BR:
erp01504
]
LJN55_05285
Chromosome and associated proteins [BR:
erp03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LJN55_05285
Transporters [BR:
erp02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LJN55_05285
Antimicrobial resistance genes [BR:
erp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LJN55_05285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
HH_MFP_RND
RND-MFP_C
Beta-barrel_RND_2
BSH_CusB
BSH_CzcB
YknX_C
HH_CzcB
HH_AAEA_pHBA
Motif
Other DBs
NCBI-ProteinID:
UDQ81272
LinkDB
All DBs
Position
complement(1127228..1128430)
Genome browser
AA seq
400 aa
AA seq
DB search
MNKNRGLTPLAAVLMLSGSLVLTGCDNKESQQAGQQQQAPEVGITTLKSAPLKITTDLPG
RTSSFRIAEVRPQVSGIILKRNFVEGSDIKAGESLYQIDPATYQAAYSSAKGDLAQAQAN
AQIAALTVKRYKPLLGTKYISQQDYDQAMATQSQTAAAVQAAQATVETARINLAYTRVTS
PISGRIGKSSVTEGALVASAQTTALATVQQLDPIYVDVTQSSEDFMRLRDELNSGKLQQT
NGKAEVKLLMQNGSEYAQSGTLEFSDVTVDETTGSITLRAVFPNPDHSLLPGMFVRARLD
EGTNPNALLVPQQGVTRTPTGQATAMVVGADNKVEVRNLTADQAFGDKWLVSAGLKDGDR
VIVTGLQRVKPGAAVTPQEVSDDSAKAGSESQAKSEQPKS
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaacagagggttaacgcctctggcggccgttctgatgctctcaggcagctta
gtgctaacgggttgtgacaacaaagaatctcagcaagccggacagcaacagcaggcacct
gaagtgggtatcacaacgttgaaaagcgccccgcttaaaattactaccgacctgccaggt
cgaacctcatcgttccgtattgcagaagttcgcccacaggtatctggcattattctgaaa
cgcaacttcgttgagggtagcgatatcaaggctggcgagtctttatatcaaattgacccc
gccacatatcaagctgcttatagcagtgcgaaaggtgatctggcacaggcacaagccaat
gcacagattgccgcattgacggtaaaacgctacaagcccctgttgggtactaagtacatc
agccagcaggactacgaccaggcaatggcaacgcaaagccagaccgccgctgccgttcag
gctgctcaggccactgtagaaacagcacgcatcaacctcgcctatactcgagtgacctca
cctatcagcggtcgcatcggtaaatcgtcggtaacggaaggcgctttagttgccagtgcg
caaaccactgcgttggcaaccgtacagcaacttgaccctatctatgttgatgtgacccaa
tccagcgaagatttcatgcgcctgcgtgatgaactgaattccggcaaacttcagcagacc
aatggtaaagctgaagtcaaactactgatgcaaaatggtagcgaatacgcgcagagcgga
acattagaattctctgatgtcactgtggatgaaaccacaggttcgatcacattacgtgcc
gtgttccctaaccctgatcatagtctgctgccgggtatgtttgtgcgtgcccgtctggat
gaaggcaccaacccgaatgcactgttggttcctcaacagggtgtgacccgtacgccaacc
ggtcaggcaactgccatggttgtgggcgcggacaataaggttgaagtccgtaatctgact
gccgaccaggcatttggtgataagtggctggtgtctgccggtctgaaagatggcgatcgt
gtgattgtgaccggtctgcaacgcgtgaaacctggtgcagcggtaacgcctcaggaagtc
agcgatgacagcgccaaagcaggttccgagtctcaggcgaagtctgaacaaccgaagtct
taa
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