Erwinia rhapontici: LJN55_10720
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Entry
LJN55_10720 CDS
T08392
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
erp
Erwinia rhapontici
Pathway
erp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LJN55_10720 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erp03400
]
LJN55_10720 (nth)
Enzymes [BR:
erp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LJN55_10720 (nth)
DNA repair and recombination proteins [BR:
erp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LJN55_10720 (nth)
Prokaryotic type
LJN55_10720 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
UDQ82266
LinkDB
All DBs
Position
complement(2271371..2272003)
Genome browser
AA seq
210 aa
AA seq
DB search
MNKEKRQEILTRLRDNNPHPTTELMFTSPFELLISVLLSAQATDVSVNKATAKLYPVANT
PAAILALGVDGVKEYIKTIGLFNSKAENVIKTCRILLEQHGGEVPESREALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVCNRTRFAPGKNVEQVEEKLLKVVPKAFMVDCHHWLI
LHGRYTCIARKPRCGSCLIEDLCEFDAKVE
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaggaaaagcgtcaggaaattttgacccggctgcgggataacaacccgcatccc
accacggaactgatgttcacctctccttttgaactgctgatttcggttctgctgtctgcg
caggctaccgatgtcagcgtgaataaagccacggcaaaactctacccggttgctaatacg
cctgccgccattctggcgctgggtgtcgatggggtgaaagagtacatcaagaccatcggc
ctgtttaacagcaaggctgagaacgtgataaagacctgccggattctgctggaacagcat
ggcggtgaagtgccggagagtcgtgaggcactggaagcgttacccggcgttgggcgtaag
acggccaacgtcgtattaaataccgcctttggctggccgactatcgccgtcgacacgcat
attttccgcgtctgtaatcgcacccgttttgcacctggcaaaaacgtggaacaggtggaa
gagaagctgctgaaggtggtgccgaaagcgtttatggtcgactgccaccactggctgatc
ttgcatggccgctacacctgcattgcgcgtaaaccgcgctgcggctcctgcctgattgaa
gatctttgtgaatttgatgctaaagtagaatga
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