Eulemur rufifrons (Bennett's brown lemur): 138392181
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Entry
138392181 CDS
T11398
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component isoform X1
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
eruf Eulemur rufifrons (Bennett's brown lemur)
Pathway
eruf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eruf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138392181 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eruf03041
]
138392181 (EFTUD2)
Spliceosome [BR:
eruf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
138392181 (EFTUD2)
Complex C
U5 SnRNP specific factors
138392181 (EFTUD2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
138392181
NCBI-ProteinID:
XP_069338817
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All DBs
Position
9:complement(40601122..40642081)
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AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDDDDDDIGDHDDDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacactgacttgtatgatgagtttgggaattacattggaccagagctcgattctgat
gaagatgatgatgaattgggcagagaaaccaaagatcttgatgagatggatgatgatgac
gacgatgatgacataggtgatcatgatgatgatcaccctgggatggaagtggtgctgcat
gaggacaagaagtactacccaacagccgaggaggtgtacggtcctgaggtggagaccata
gttcaggaggaagacacacagcctctcacagaacccattattaagccagtgaaaacgaag
aaattcactctgatggagcagacattacccgtcacagtatatgaaatggatttcttggcg
gacctgatggataactcggagctcatcagaaatgtgaccctttgtggccatctccaccat
ggcaagacgtgttttgtagattgtttaatcgagcagactcacccagaaatcagaaagcgc
tatgaccaagatctatgctatactgacatcctcttcacagagcaagagagaggtgttggc
atcaaaagcactcctgtgacggtggtcttgccagataccaaaggaaaatcttacctattc
aatatcatggacaccccaggacatgtgaatttttctgatgaggtcacagctggcttgcgt
atctcagacggagtggtccttttcatcgatgctgctgagggggtgatgctgaacacagag
cggctgatcaagcacgcggtgcaggagaggctggcggtcactgtgtgcatcaacaagatt
gaccggctgatcctggagctgaagctgcctccaactgatgcttattacaagctgcgccac
attgtggatgaggtcaatggattaataagcatgtattccactgatgagaacctgatcctt
tccccactcctgggcaacgtctgcttctccagctcccagtacagcatctgcttcacgctg
ggctcctttgccaagatctacgccgacaccttcggtgacattaattaccaggaatttgct
aaaagactctggggtgacatctacttcaaccctaagacgcgaaagttcacaaaaaaggcc
ccaaccagcagctctcagaggagcttcgtggagtttatcttggagccactttataagatc
cttgctcaggttgtaggtgatgtggacaccagcctcccgaggaccctggacgaacttggc
atccacctgaccaaggaggagctgaagttgaatatccgccccctgctcaggctggtctgc
aaaaagttctttggcgagttcacaggctttgtggacatgtgtgtgcagcatattccttct
ccaaaggtgggcgccaagcccaagattgagcacacctacactggtggagtagactctgac
cttggcgaggccatgagtgactgtgaccctgatggtcccctgatgtgccacactactaag
atgtacagcacagatgatggagttcaatttcatgcctttggccgggtgctgagtggcacc
atccatgctgggcagcctgtgaaggtgctaggggagaactacaccctggaggatgaggaa
gactcccagatatgcaccgtgggccgcctttggatctctgtggccaggtaccacattgag
gtgaaccgtgttcctgccggcaactgggttctgattgaaggtgttgatcaaccaattgtg
aagacagcgaccataactgaaccccgaggcaatgaggaggctcagattttccggcccttg
aagttcaatactacatctgttatcaagattgctgtggagccagtcaacccctcagagctg
cccaagatgctcgatggtctgcgcaaagtcaacaagagctatccatccctcaccaccaag
gtggaagagtctggtgagcatgtgatcctgggtaccggggagctctacctggactgtgtg
atgcacgatttgcggaagatgtactcggagatagacatcaaggtggctgacccagttgtc
acattttgtgagacggtggtggaaacatcctctctcaagtgctttgctgaaacacccaat
aagaagaacaagatcaccatgattgctgagcctcttgagaagggcctcgccgaggacata
gagaacgaggtggtccagatcacgtggaacaggaagaagctgggagagttcttccagacc
aagtacgactgggatctgctggctgcccgttccatttgggcttttggcccagatgccact
ggccccaacatcctggtggatgatactctgccctctgaggtggataaggcccttcttggc
tcagtgaaagacagcatcgttcaaggtttccagtggggaaccagggaggggcccctctgt
gatgagttgattcggaacgtcaagtttaagatcctggatgcagtggttgcccaggagccc
ctgcaccggggcgggggccaaatcatccccacggccaggagagtcgtctactctgccttc
cttatggccactccccgtctcatggagccttactactttgtagaggtccaggcccctgca
gattgtgtctctgcggtttacactgtcctggccaggcgcaggggacacgtgactcaggac
gcacccatcccaggctcccccctctacaccatcaaagctttcatcccagccatcgactct
tttggctttgagactgatctccggactcatacccagggacaagccttttccttgtctgtc
ttccaccattggcagattgtacctggtgatcctctggacaagagcattgtcattcgtccc
ttggagccacagcccgctcctcacctggcccgggaattcatgatcaaaacccgtcgtagg
aagggcctcagtgaagacgtgagcatcagcaagttcttcgacgatcctatgttgctggag
ctcgccaaacaagacgttgtgctcaattaccccatgtga
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