Egibacter rhizosphaerae: ER308_17395
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Entry
ER308_17395 CDS
T05860
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
erz
Egibacter rhizosphaerae
Pathway
erz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
erz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ER308_17395 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
erz03400
]
ER308_17395 (nth)
Enzymes [BR:
erz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ER308_17395 (nth)
DNA repair and recombination proteins [BR:
erz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ER308_17395 (nth)
Prokaryotic type
ER308_17395 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
QBI22094
UniProt:
A0A411YLK5
LinkDB
All DBs
Position
3785775..3786458
Genome browser
AA seq
227 aa
AA seq
DB search
MRAPEILDRLHEAYGDGVVELDWETPWELLVATILSAQSTDKKVNELTPYLFRKYPDPAA
VLATPEEELERDIYQTGFYRQKSQALRGVSAALLEHHDGQVPTSMAELIALPGVARKTAN
VVLGAAAPGAHAADPEAGIAVDTHVKRLARRLGFTTETDPNKIERDLMRLFPKERWPRAS
LVIILHGRRVCEAQRPRCADCVLEDLCPSSLAAGCRDKARQAKEMGT
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
ctgcgggcccccgagatcctcgatcggctgcacgaggcctacggcgacggcgtcgtggag
ctggactgggaaacgccgtgggagctgctcgtcgcgacgatcctgtcggcacagtcgacc
gacaagaaggtcaacgagctcaccccgtacctgttccgcaagtaccccgatccggcggcg
gtcctcgcgactcccgaggaggagctcgagcgcgacatctaccagaccggcttctaccgc
cagaagtcgcaggcgctacgaggggtgagcgccgcgctgctcgagcaccacgacgggcag
gttccgacctcgatggcggagctgatcgcacttcccggcgtggcgcgcaagacggcgaac
gtcgtgctcggtgcggccgcacccggggcccacgccgctgatccggaggccggcatcgcg
gtcgacacccacgtcaagcggctggcccggcgcctcggcttcaccaccgaaaccgatccg
aacaagatcgagcgggacctgatgcggctgttccccaaggagcggtggccgcgggcgagc
ctcgtgatcatcctgcacgggcggagggtctgcgaggctcagcggccgcggtgcgccgac
tgtgtgctcgaggacctctgtccctcgtcgctggccgcggggtgtcgcgacaaggcgcgc
caggccaaggaaatggggacctga
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