Candidatus Electrothrix scaldis: SD837_04715
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Entry
SD837_04715 CDS
T11025
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
esd Candidatus Electrothrix scaldis
Pathway
esd01501
beta-Lactam resistance
esd01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
esd00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SD837_04715
01503 Cationic antimicrobial peptide (CAMP) resistance
SD837_04715
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
esd02000
]
SD837_04715
01504 Antimicrobial resistance genes [BR:
esd01504
]
SD837_04715
Transporters [BR:
esd02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SD837_04715
Antimicrobial resistance genes [BR:
esd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SD837_04715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF4875
Motif
Other DBs
NCBI-ProteinID:
WPD23864
LinkDB
All DBs
Position
1049832..1053089
Genome browser
AA seq
1085 aa
AA seq
DB search
MLSKFFLERPVFAWVVAIIIMTLGALAIHQMSISQYPPIAPPAIAIDAFFPGASAETVEN
TVTQVIEQKMTGLDDMIYLSGTSSSSGSARVELTFAAGTDPDLAWAKVQNKLQLALASLP
DVVQRSGVQVSKSTRNWLLIPALISEDGSMDNNDLQDYAQSNLEKVLARIPGVGEVQAFG
SQYAMRIWINPDKLTSYSLTFEDVMTALRSYNVEVSAGQLGGTPAEEGQRLNAPIVVQHL
LQTPEEFAEIPIRINQDGSAVRVKDVGRTELAIERSDSVVRSNGRPAAGMAVRQAAGANA
LETAKAIKAKLEEMSKFFPPGVKVIYPYDTTPFTQVSIDEVIKTLFEAIILVFIIMYVFM
GNIRATIIPTIAVPVVLLGTFAVLGFAGYSINMLTMFAMVLAIGLLVDDAIVVVENVERI
MSEEGLPPKEATAKSMDEITSALIGIGLVLSAVFGPMAFFPGSTGILYRQFSVTLIAAML
FSVVVALILTPVLCATFLKPVKAGHAPSENAIFFMRPFFAVFEFCFGGIRSLYVRFVALS
LRIKFIFIVCYLLIVALAGFLLQRMPTSYVPDEDQGMVLVQIMLPSGSTLEQTEAVVTKV
RNYFLENEEEAVKNVMTISGRNFGGQGQNLAMSFVKLKDWEERQRPDLKVKPIADRAMAA
LSQIKEAKVFSFPPPPVIELGMANGFDFQLQDLGGLGHEALTQARNQLLGMAAQDPRLMG
VRPNGMMDTPEYRVDVNWDRAGALGVPLSSIHSTLSTAFGSAYVNDFIQAGRVKKVYVQA
DAAYRGLPQDMEKLYVRNTKGKMVPFSAFATGRWAQGAPKLERYNAFPSMNIQGQPAPGH
STGEAMAAMEELVTKLPQGVGFDWSGLSYQEKMATKQGPILYAFSILVIFLCVAALYESW
TIPIANLLMLPLGVFGAIIASSLRGLPNDVYFQIGFLTTMGLSTKNAILIIQFIKERMAV
GQGLIEATLDAVKTRFRPVMMTSLAFFFGVLPLAIASGAGAGAMNALGTAVCGGMLSATF
IDLVFIPLFFVLVSQLFGKKEDKQGPSQPMQPAKVSEKKQESKEVLPPSQQPKQLDTSHP
QEVQS
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgctctcaaaattttttcttgaacgacccgtctttgcctgggttgttgccattattatt
atgaccttgggagcactggctatccaccagatgtccatctcccagtatccgccgattgcc
ccgccagctattgccattgatgcctttttccctggtgcatctgctgagactgtggaaaac
accgtgacccaggttatcgagcagaagatgacgggcctggatgatatgatctatctctcc
ggcaccagctcttcttcaggctctgcccgggtggagttgacctttgctgccggaaccgac
cctgatttggcctgggccaaggtgcagaacaagctccagctggccctggctagcctgccg
gacgtggtgcagcgttccggtgtacaggtaagtaagtcgacccgcaactggctcctcatc
cccgctctgatttcggaagacgggagcatggataataacgacctccaggactatgcccaa
tccaatctggaaaaggtcctggcccgtattcccggtgttggtgaggtgcaggcctttggt
tcccaatacgccatgcgtatctggatcaacccggataaactgaccagctatagtctgacc
tttgaagacgtgatgacggccctgcgttcctataacgtggaggtctcggccggacagttg
ggtggtaccccggccgaagaaggtcaacggctcaatgcccccatagtggttcagcatctc
cttcagaccccggaggagttcgccgagattcccatccgtatcaatcaagacggttctgct
gtacgggtcaaggatgtgggccgtaccgagctggctattgagcgtagcgattccgtggtt
cgcagtaatgggcggcctgctgcgggtatggcggtgcggcaggctgctggagccaatgcc
ctggaaacagccaaggctatcaaagcgaagctggaagagatgagcaagttcttcccgccg
ggcgtcaaggtgatctatccctatgataccacgccctttacccaggtctctattgatgag
gtgatcaagaccctgttcgaggcgatcatcctggtcttcattatcatgtacgtgttcatg
gggaatatccgggccaccattatccccaccatcgccgtgcctgtggttctgcttggtacc
tttgccgtgcttggttttgccgggtactccatcaatatgctgaccatgtttgctatggtt
ctggccatcggtttgctggtggacgacgccatcgtggtggtggagaacgtggaacgtatc
atgagcgaggagggcctgccgcccaaagaggccacagccaagtctatggatgagatcacc
agtgccctgatcggtattggtctggtgctgtcagcggtctttggtcctatggcctttttt
cccggctccaccggaattctctatcggcagttttcagtcaccctgattgcggccatgttg
ttctcggtggtggtcgcgttgatcctgacccctgtcctctgtgccacctttctcaagccg
gtaaaggcgggacatgcaccctctgagaatgccatcttctttatgcggcccttttttgcc
gtgttcgagttctgctttggcgggatccgcagcctctatgtccgctttgttgccctttct
ctgcggatcaagtttatctttattgtttgttatttgcttattgttgccctggctggtttt
cttctccaacgaatgccgacttcttatgtcccggatgaggatcagggaatggtcctggtt
caaatcatgttgccctctggttccactctggagcagactgaagccgtggtcaccaaggtt
agaaattattttctggagaatgaagaggaagccgtgaaaaatgttatgaccatctctggt
cgtaactttggtggacagggccagaatctggccatgagctttgttaaactgaaagactgg
gaggaacggcagcgaccagacctgaaggttaaacccatcgcagatcgggcaatggctgcc
ctgtcacagatcaaggaagccaaggtcttttcctttccgccgccaccggttattgagttg
ggtatggccaacggctttgactttcagctccaggatctgggtggattagggcatgaggcc
ctgacccaggcccgtaaccagttgctggggatggctgcgcaggatccccgtttgatgggg
gttcggcctaacggcatgatggacactccagagtatcgggtggacgtaaattgggatcgg
gctggagccctgggtgtgccgctgagctccattcatagtaccttgtccaccgcctttggt
agtgcctatgtgaatgactttatccaggctggacgagtcaagaaggtctatgtccaggct
gatgctgcgtatcgtggtttgccccaggatatggaaaaactctatgtcaggaatacaaaa
ggtaagatggtccccttttctgcctttgccacagggcgctgggctcagggcgcgcccaag
ctggaacgctataatgccttcccgtccatgaatatccaggggcagccagcaccggggcat
agtacgggtgaggcaatggcggcaatggaggagctggtcaccaagttgccccagggtgtt
ggttttgactggagcggtctttcctatcaggagaagatggccactaaacaggggccgatt
ctttatgccttctctattctggttatcttcctctgtgtggcggccctgtatgaaagctgg
actattcccattgccaacctgctcatgctacccctgggtgtcttcggggccattattgcc
tcctcgctacgcggcttgcccaatgatgtgtatttccagatcggctttctgaccactatg
ggcttgtccaccaagaacgctattctcatcatccagttcatcaaggagcgcatggccgtg
ggccagggcctgattgaagccaccttggatgcggtcaagacccgattccgtccggttatg
atgacctcgctggccttcttttttggcgtgttgcccttggctattgccagcggtgcaggt
gcaggtgctatgaatgccttgggaacagcggtttgtggtggtatgctttccgctaccttc
attgatctggtctttattccgctcttctttgttctcgtttcccagctttttggcaagaaa
gaggacaagcagggaccaagtcaacccatgcaaccagccaaggtttcagagaaaaagcag
gaatcgaaggaggttctgcccccttctcagcagcctaagcaacttgatacttcccaccct
caggaggtgcagtcataa
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