Eriocheir sinensis (Chinese mitten crab): 127010133
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Entry
127010133 CDS
T08870
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
esn
Eriocheir sinensis (Chinese mitten crab)
Pathway
esn04120
Ubiquitin mediated proteolysis
esn04140
Autophagy - animal
esn04144
Endocytosis
esn04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
esn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127010133
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127010133
04140 Autophagy - animal
127010133
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
127010133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esn04131
]
127010133
04121 Ubiquitin system [BR:
esn04121
]
127010133
Enzymes [BR:
esn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127010133
Membrane trafficking [BR:
esn04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
127010133
Ubiquitin system [BR:
esn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
127010133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_3
TRAF3_RING
Sina_ZnF
RING_XB3-XBAT31
zf-TRAF_2
Motif
Other DBs
NCBI-GeneID:
127010133
NCBI-ProteinID:
XP_050739933
LinkDB
All DBs
Position
42:complement(14224027..14233173)
Genome browser
AA seq
688 aa
AA seq
DB search
MISAVPSYRDLTLKMETLSEGGQGESYVLSRTEGYDYEFVPTLEQKYECPICLLALRAPL
QTSCGHRFCKDCIHNTLSLSESHRRCPIDNTPLGESDLFPDCCAEREVLQLKVRCPNSSL
GCTQIVDLMYIEHHTQACSYQPVLCPNECSAMVLQRELEQHLSSQCLLRQKLCALCNEPY
TCSQEQLHLATCGQVLVGCELCGSEVVRGELPAHMSDSCPKGVVSCPFTEHGCCHKMVRA
DLDDHLAQSTQYHLHLLSSAQKRITALVWEVSRSAGLAVLGSSPGSLSFSRQPSLRSQLS
TSSPTPDRHDGGGGGGLVFPSPPKYGGGAFGGASGGGGVLPFPSPPLKLNTTTDNTTPSK
LHIPFSHLAMGLEEEVEGETEGRKGGSGGKGGGGTGGGSISLPPQQEAILRDLCEKRLEV
SQGLLQVNIALANLQRQVEGVEGRVERAGGDAEGRFCHGVYVWRLRGFPSLVEELQERPT
RVLHSPAFYTSPFGYKFCMRLNLTLMEAGRGGGGGGAPSLGRGGSTNANLIGGRGGEGVG
GGGGGGNSLARGGGGGWWLSLFIHGMRGENDTFLDWPFAGTITFAILDCSDAKTKTHISE
TLQSSPDRQAFSRPQAHRNPKGFGYTEFASLDTVLNGGAGGGVYVVDGTLCIKASVSTGQ
HQSRHQHSEGSGRAACICQHQQKSGSKV
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgatctctgcagtgccttcctaccgtgacctgaccttaaagatggagaccttgtccgag
gggggtcagggggagtcctacgtcctgtccaggaccgagggctacgactatgagtttgtc
cccaccttagagcaaaaatacgagtgtccaatctgtctacttgctctgagggcgccgctg
cagacctcctgtggccatcgcttctgtaaggactgcatacacaacaccctaagcctgagt
gagtcccatcgtcggtgccccattgacaacacgccgctgggtgagtccgacctcttcccg
gactgctgtgctgagagggaggtcctgcagctgaaagtccggtgtccaaactcttccctc
ggctgtacccaaatagtggacctcatgtacattgaacaccacacccaggcctgtagctac
cagcccgtcctgtgccccaatgagtgctcagccatggtgctgcagcgagaacttgagcag
cacctgtcctcccagtgcctgctgcgccagaagctgtgtgccctctgcaacgagccctac
acatgcagccaggagcagctccacctggcaacatgtggacaggtgctggtggggtgcgag
ctgtgtggaagcgaggtggtgcgcggggagctgccggcacatatgagcgacagctgtccc
aagggtgtggtgtcctgccctttcacggaacacggctgctgccacaagatggtgcgcgca
gacctggatgaccacctggcgcagtccacacagtaccacctgcatctcctgtcatccgcc
cagaagcgcatcaccgccctggtctgggaggtcagccggtcagctggtctggcggtcttg
ggcagctcacccggtagcctctcgttcagccgtcaaccgagtcttcgaagtcaactgtca
acctcatcaccgacacccgacaggcatgatggtggtggtggtggtggtttggtgtttccg
tcacctccaaaatatggtggtggtgcatttggtggtgcgtctggtggtggtggtgtgtta
cccttcccctcacctccactcaagctcaacaccaccacagacaacaccactccgtcaaaa
ctccacattccgttttcacacctagcaatggggcttgaggaggaggtggagggagaaaca
gagggaagaaagggagggagcggagggaaggggggagggggcactggaggggggtcaatc
tccctgcccccccaacaggaagccattctccgcgacctctgcgagaagcgccttgaggtc
agccaaggtctattacaggtcaatatcgcgttggcaaatttgcagcggcaggtggaaggg
gtggagggcagggtggagagggcagggggggatgcggaggggcggttctgccatggggtg
tacgtgtggaggctgcgtggatttcccagtctggtggaggagctgcaggaacggccgacg
cgggttctccactcacccgcattttacacatcgccatttgggtataagttctgtatgcgg
ctgaatttgacccttatggaagcaggaagaggaggaggaggaggaggagcacccagttta
ggaagaggaggatctacgaatgctaaccttataggaggaagaggaggagaaggagttgga
ggaggaggaggaggaggaaacagcctagcccgaggcggaggaggtggatggtggctatcg
ctcttcatccacggcatgcgtggcgaaaatgacaccttcctggactggccattcgcagga
acaatcaccttcgcgattctcgactgctcggacgcgaagacaaaaacacacatttcggaa
acgctgcaaagttcgccagaccgccaggcattcagtagaccccaagcccatcgcaacccc
aagggcttcggatatacagagttcgcttccctcgatacggtgttgaacggaggtgccggt
ggtggtgtgtatgtggtagatgggacgctgtgtattaaggcgtcggtgagtacaggtcaa
caccagtctcggcaccagcattccgaagggtcaggtcgcgcggcgtgtatctgtcaacac
cagcagaagagtgggagtaaggtgtga
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