Etheostoma spectabile (orangethroat darter): 116669495
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Entry
116669495 CDS
T08457
Name
(RefSeq) short transient receptor potential channel 5-like isoform X1
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
esp01009
]
116669495
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
esp04040
]
116669495
Protein phosphatases and associated proteins [BR:
esp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116669495
Ion channels [BR:
esp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116669495
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_5
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
116669495
NCBI-ProteinID:
XP_032355296
LinkDB
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Position
19:10024954..10092788
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AA seq
1100 aa
AA seq
DB search
MNPMTQLYYKKATYSPYRDRIPLQIVRAEVELSAEERAYLTAVEKGDYAGVKHALREAEV
YYNMDVNCLDPLGRSALLIAIENENLEIMELLLDHGIHTGDALLYAIRKEVVGAVELLLS
HRRPSGEKQVPSLMMDSQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKRFAKDLLDQARSSRELETILNHRDNDQSEELDPRQCHDLAKLKLAIKY
HQKEFVAQPNCQQLLATLWYDGFPGWRRRHWAVKLVTCFIIGLLFPFFSLIYLLAPKSAL
GRFIKKPFIKFICHTASYLTFLFLLLLASQHIARTNLHMQGPPPTLVEWMILPWVVGFIW
AEIKEMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNSSRPREEWEMWHPTL
IAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYFYYETKASEEPNNCKGIRCERQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEF
TEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIAQHLDHADIEWKFARTKLWMSYFDE
GGTLPPPFNIIPSPKSILYLLVWLHNKLCRRGHAPGEETHKCENLREFTERHADSLIQNQ
HYQEVIRSLVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRRPPRRHY
SSSSEAARDDGAMASEDDSESGDGGSGCPRSKSVTFVTPGEGEAGSPTLGVSALVRSISG
LTRTDREGEGEGEEEEEEELEEGVGWGKEEEDEEGKPKSNGLKTSVITPSSSSTTSLPCP
SSSFSSSFSSSFARTRTRLQRLSAPGSKTDSFKRLSYLFSRSKRRSPPMPLPLQSPPSYT
ISDGLLRPLGSSHSDFGLSGVTRSETRLNEVGRSVDVSNPSLSPRRANGRDSLLALPLPP
PCPCQSLHCASNMSESSSRLLDSSEDIFQGGAGGVGEGDVDGGGARRGGGLMMIGGYMGP
CDDVTEDSCEVIEDSVTTQL
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccatgacacagttgtactacaagaaggcgacgtactcgccgtaccgcgaccgc
atcccgcttcagatcgtccgggcggaggtggagctgtccgcggaggagagggcctacctc
accgctgtggagaaaggtgactatgcgggtgtcaagcatgccctgcgcgaggcggaggtc
tactacaacatggacgtgaactgtctggacccgctgggccgcagcgcgctcctcatcgcc
atcgagaacgagaacctggagatcatggagctcctgctcgaccatggcatccacactggc
gacgccctgctctacgccatcaggaaggaggtggtgggcgccgtggagctgctgctgtcg
cacaggaggcccagcggcgagaaacaggttccctcgctgatgatggacagtcagttttca
gagttcaccccggacataactcccatcatgctcgctgctcacaccaacaactacgagatc
atcaagctcctcgtccagcggaaggtcaccattcccagaccacaccagatacgatgtgat
tgtgtcgagtgtgtttccagttcagaggtcgacagtcttcgacattccaggtctcgactc
aacatctacaaggctctggcctcgccctccctcatcgcgctttccagtgaagatcccatc
ctcactgccttcagactgggctgggaactcaaagagctcagcaaggtggagaacgagttt
cgtcaggagtacgaggagctgtcgcagcagtgcaagcggttcgccaaagaccttctggac
caagccaggagttctagagagctggaaaccatcctgaaccacagagacaatgaccagagc
gaggaactggaccccaggcagtgccacgacctggccaagctcaaactggccatcaaatac
caccaaaaagagtttgtggcccagcccaactgccagcagctgctggccacgctgtggtac
gacggcttcccgggctggaggagacggcactgggcggtcaaactggtcacctgcttcatc
attggactcctgtttcctttcttctcactgatctacctgttggcgccaaagagcgctctg
gggcgcttcatcaagaagcctttcatcaagttcatctgtcacacggcgtcctacctgacc
ttcctcttcctcctgctgctggcctcgcagcacatcgcccggaccaacctgcacatgcag
ggacccccgcccaccctcgtcgagtggatgattctcccgtgggtagtggggttcatctgg
gcagagattaaggagatgtgggacgggggattcacagagtacatccacgactggtggaac
ctgatggacttcgctatgaactccctctacctggccaccatatcactgaagatagtggcc
tacgtgaagtataactcctctcgacccagggaggagtgggagatgtggcaccccacgctg
atagccgaggctctgttcgccatcgccaacatcttcagctcgctcagactcatctccctc
tttacagccaactcccacctcgggccactgcagatctcactgggcaggatgctgctggac
atcctcaagttcctcttcatttactgtctggtcctgctggcgtttgccaatggtctgaac
cagctgtatttctactatgagaccaaggcctcagaagaacccaacaactgcaagggcatc
cgctgtgagaggcagaacaacgccttctcaacgttattcgagaccctccagtctctgttc
tggtcgatattcgggctgctgaatctgtacgtgaccaacgtgaaggcccgccacgagttc
acagagttcgtcggggcgaccatgttcgggacgtacaacgtcatctcgctggtggtcctg
ctcaacatgctcatcgccatgatgaacaactcctaccagctcatcgctcaacatttggac
cacgccgacatcgagtggaagtttgcccgcaccaagttgtggatgagctacttcgacgag
ggcggcacgctgccgcctccgttcaacatcatccccagccccaagtccatcctctacctg
ctcgtgtggctccacaacaagctgtgcagaagaggccatgcgcccggggaggaaacacac
aaatgtgaaaacctccgagagttcacggaacgccacgctgacagtctgatacagaaccag
cattaccaggaagtgatccggagcctggtgaagaggtacgtggcagccatgatccgcagc
gccaagacggacgagggactaacggaggagaactttaaggagttgaagcaagacatctcc
agtttccgctacgaggtcctggatctcctaggcaaccggcggcctccccggcgacactac
tcctcctccagtgaggcagctcgagacgacggcgccatggcatcggaggacgacagcgag
tcgggcgacggcggcagcggatgcccgaggtcaaagagcgtgacgttcgtgaccccgggg
gagggcgaagcggggtcaccaacgcttggcgtgtccgccctggtgcgctcaatttctggg
ctgacccggacagatagagagggagagggagaaggggaggaggaggaggaggaggagctg
gaggagggcgttggatgggggaaagaggaggaggacgaggaggggaaaccaaagagcaac
gggctgaagacgagcgtcatcactccatcctcctcctccaccaccagccttccctgcccg
tcttcatccttctcctcgtccttctcctcgtcgtttgctcgcaccaggacccgcctgcag
cgcctctcggctccgggatcaaagacggactctttcaagcgcctctcctacctgttctcg
cgctccaaacgcagatccccgcccatgcctctcccgctccagtccccgccctcctacacc
atctccgacgggttgctccgccccctgggcagctctcactccgacttcggactcagcggc
gtgacccgaagcgagacccgcctgaacgaggtgggccgctcggtcgacgtcagtaaccct
tcgttatccccgcggagagcgaacgggcgggactcgctcctggctctgcccctcccgccc
ccgtgcccctgccagtccctacactgtgcttccaacatgtccgagtccagctcgcgcctc
ctggactccagcgaggacattttccagggaggcgcgggaggagtgggcgagggcgacgtg
gacggaggaggggcaagaagaggaggagggctgatgatgattggcgggtatatgggaccc
tgcgacgatgtcacagaggacagctgtgaggtcatagaggactccgtcaccacgcagcta
tag
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integrated database retrieval system
