Etheostoma spectabile (orangethroat darter): 116669929
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Entry
116669929 CDS
T08457
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116669929 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116669929 (c9orf72)
Membrane trafficking [BR:
esp04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
116669929 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
DUF7645
Motif
Other DBs
NCBI-GeneID:
116669929
NCBI-ProteinID:
XP_032355962
LinkDB
All DBs
Position
20:complement(14988852..15002806)
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AA seq
462 aa
AA seq
DB search
MSSGCPPQSPAVAKSEVAVEGECPMLAATFAYWDNILGPRVRHIWTPKGDQLMFLSDGEV
TFLANHTLNGEILRSAECGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQT
ELAFYLPLHAICVERLKHVIRKGRIWMQKGYNIISVLSLEIVPIMELLASMKTHSVPEDI
DIKDTVLNDDDIGDSCHEDFLHKAISSHLQTCGCSIVVGSNPEKVNKIVRTLCLFLTPAE
RKCSRLCKADSSFKYDTGLFVQGLLKDSTGSFVLPFRQVLYSPYPTTHIDVDINTVKQMP
PCHEHTYNQRRYMRSELSALWKTDSEDDIPPDTVIHTDETFTPDLNIFQDVLHKDTLVKS
FIDEVFMLKPGLSLRSTYLAQFLLLLHRKALTLLKYIEDETQKGKKPFRSLRNLKTDLDL
TLEGDLNIVMAFAEKLRAGLHSFVFGKPFYTSMQERDALMSF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctggctgtccaccccagtcaccggctgtggctaagtctgaggtagcagtagag
ggagaatgcccgatgctggctgccacctttgcctactgggacaacatcctgggtccacgg
gtgcgccacatctggacaccaaagggagaccaactgatgttcctcagcgatggagaagtc
acatttcttgccaatcatacacttaatggggagattctgcgtagtgctgagtgtggcgct
gtggatgtgaagttctttgtcctggcagaaaagggcgtcattattgtgtcgctcattttc
gatggagagctgaagggggacaagaacacatgcgccttgtccattatcctacctcagact
gagctggccttctatctacctctgcatgccatctgtgtggagagactgaagcatgtcatc
cgcaagggacgcatttggatgcagaagggctacaacatcatctcggtgctgagcttggag
attgtccctatcatggagctgttggcctccatgaagacacacagtgtgccagaagatata
gatataaaagacaccgtgctaaatgatgatgacatcggggacagctgccacgaggatttc
ctccacaaggccatcagctctcatctgcagacttgtggctgttccatagtggttggaagc
aacccagagaaagtaaataagattgtacgaactctctgcctctttctcaccccggctgag
aggaagtgctcgcgcctctgcaaggccgactcttctttcaaatacgacacaggcctgttt
gttcagggtctgctcaaggactctacaggcagctttgtcctgcccttccgccaggtgctc
tactccccttacccgaccacgcacatcgacgtcgacatcaacacagtcaagcagatgcca
ccgtgccacgagcacacgtacaaccagcggcgctacatgcggtctgagctaagcgctctg
tggaagacggacagcgaggacgacataccccctgacacagtcattcacactgacgaaacc
ttcacaccagacctgaatatatttcaggacgtcctgcataaagacactttggtgaagtca
tttatagatgaggtgttcatgctgaagccaggcctgtccctgcggagcacctatctggcc
cagttcctgctgctgctccacaggaaggccctcacactgctcaagtacattgaggacgaa
acgcaaaaagggaagaagccgtttcgatcactgcgtaacttaaagacggacctagatctg
acgttggaaggagacctgaacattgtaatggccttcgctgaaaagctcagggcaggactg
cactcttttgtgtttggcaagcccttctacaccagcatgcaagaacgagacgcgctcatg
agcttttga
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