Etheostoma spectabile (orangethroat darter): 116670329
Help
Entry
116670329 CDS
T08457
Name
(RefSeq) otoferlin-like isoform X1
KO
K19949
otoferlin
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116670329
Membrane trafficking [BR:
esp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116670329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
FerA
Motif
Other DBs
NCBI-GeneID:
116670329
NCBI-ProteinID:
XP_032356683
LinkDB
All DBs
Position
20:2077927..2101856
Genome browser
AA seq
1794 aa
AA seq
DB search
MKRSKHRGHKEDRNGDEPAILETEDLDRQGMFMGGGPDPDTVSLASVTAVTTNVSNKRSK
PDIKMEPSSGRPVDYQISVTVIEARQLVGLNMDPMVCVEIGEDKKYTSMKESTNCPYYNE
YFVFDFHVPPDVMFDKILKLSVIHSKNLLRSGTLVGTFKLDVGTIYSQPEHQFYHKWALL
IDPEDISGGCKGYIKCDIAVVAKGDTIKTPHKANESEEDDIEGNLLIPEGVPAERQWARY
YLKIYKAEGLPRMNTSIMANVKKAFIGENKDLVDPYVLVQFAGQKGKTSVQKSCYEPIWN
EQIVFTEMFPPLCKRMKIQLRDSDKVNDVAIGTHFLDLRTISNDGDKGFLPTLGPAWVNM
YGSTRTYTLMDEYQELNEGLGEGVSFRARLLINLGVEILDPSSPDISNSTDVQLEGVSNI
AETATGKVEEFFLFGSFLEATMIDRKIGDKPINFEVTIGYYGNEIDGAARPNKKGVKGKD
GDEEETELIHNSSEEELDDDGDLTSVATTPPMKPVITDRNYFHLPYFERKPCVYIKSWWQ
DQRRRLYNANIIDNIADKLEDGLNDVQEIIKTEKTYPERRLRGVLEELSQGCSQFLLLAN
KDQNSSGRTKLDRERLKLCMSEVESIGQQAKAMRSQVKKSTVRDKIKLAQNFLTKLRFLA
EEPQHSVPDVFIWMISNGKRIAYARVPSKDILYSSIEEETGKDCGKVKTIFLRIPGKKGF
GPAGWTVQSKIEIYLWLGLTRQRKDYLKGLPNGFEENKLSKGPGMPCSPPISLTYMMKQI
FQLRAHMYQARSLFAADSTGLSDPFARIFFSTQSQVTEILPETLCPTWDQLLVFENVELF
GEAIELRDDPPIIVIELYDQDTVGKAEFMGRTFAKPVVKMADEHYGPPRFPPQLEYYQIY
RGNCTAGEMLAAFELLQIGPNGKADLPPIDGPTDMERGPILPVPLGIRPVLSKYRIEVLF
WGLRDLKRVNLAQVDRPRVDIECAGKGVQSALIPNYKKNPNFSTLVKWFEVDLPENELLH
PPLNIRVVDCRAFGRYTLVGSNAVTSLRKFIYRAKDKQANNWSTTEEIIVVNIEPESGFK
KMDTVVKLDSCADTVVKVEDDDKDGKGRKKKRKKGDEIEEEELDESMLDWWSKYFASIET
LTEVLKAQEAALSDSEDKDEMDIADGGDIKLDDSPVKGTKKGKGKKKKEKPGIDPFEKKK
PKLDELKVYPKELESEFDNFEDWLHSFNLYRGKGGDDEDQNMMDEDRIVGKFKGSLCMYK
VSDDMPRDMSLDSNMGMFQNIPHNDPINILVRIYIIRATDLHPADINGKADPYIAIKLGK
TEIKDKENYISKQLNPLFGKSFDVEATFPMDSTLTVSIYDWDLVGTDDLIGETKLDLENR
FYSKHRATCGVACNYAIHGYNVWRDPMKPTQILAKLCKDGKLDGPHYGPAGRVKVENRVF
IAPTELEDENGLKKQTDEHVALTVLNHWEEIPRVGCKLVPEHVETRPLHHPDKPGIEQGR
IEMWVDMFPKDMTAPAPALDISPRKPKKFELRVIIWNTDEVVLEDDDIFTGEKSSDIFVR
GWLKGQQEDKQDTDVHYHSITGEGNFNWRFVYPFDYLMAEEKIVISKKESMFAWDETEYK
IPARLNLQVWDADHFSADDFLGAIEIDLNRFPRGAKTAKQCTIEMVTNEAEMPMVSIFKQ
KRIKGWWPFVARNEDDEFELTGKVEAELHLLTGEEAERSPVGEGRNEPDPLEKPNRPDTS
LLWFLTPLKAIRNLVCNQYRWLTIKIVSALLLLAMLALFLYNMPGYMVKKMLGA
NT seq
5385 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcagtaagcaccgtggacacaaggaggacagaaatggagatgagccagctatt
ctggagacagaggacctggatcgtcagggaatgttcatgggaggaggcccagatcccgac
accgtctcactggcctccgtcacagccgtcaccaccaatgtatcaaataagagatcaaag
ccagacataaagatggaacctagttctggaagaccagtagattaccaaatcagtgtgaca
gtgattgaagccaggcagctggttggactaaacatggatccaatggtttgtgtggagatt
ggagaagataaaaagtacacctcaatgaaggaatcgactaactgcccatactacaacgaa
tattttgtgttcgacttccacgtccctccagatgttatgtttgacaaaatcctgaagttg
tctgtaattcactccaaaaaccttctgcgtagtggaacactggttggaacttttaaactg
gatgttggcacaatctacagccagcctgaacatcagttttaccacaagtgggctttgctg
attgaccctgaggacatctcagggggctgcaaaggctacatcaagtgtgatattgcagtt
gtggccaaaggagacaccataaagactccacacaaggccaatgaatcagaagaagatgac
atagagggcaatctcttaataccagagggggtgcctgcagagcgacagtgggctcgttat
tacctgaagatctacaaggccgagggactccctagaatgaacaccagcatcatggctaac
gtcaaaaaggccttcataggtgaaaataaggacctggttgatccttatgtcctagtacag
tttgctgggcagaaagggaaaacatcagttcaaaagagctgctatgagcctatctggaac
gagcaaattgttttcactgagatgtttccgccactatgcaagcgcatgaagatccagctc
cgggactcagataaagtaaacgatgttgccattggaacacacttcctggaccttcggact
atttccaatgatggggacaaaggcttccttcccacgctgggacctgcctgggtaaacatg
tacggctccactcgtacctacaccctgatggacgagtaccaggagttaaacgaagggctc
ggagagggagtgtccttcagggcccgtctgctcatcaacctgggtgtggagatcctagat
ccctcctcgcctgacatttccaactccacagatgtgcagttggagggtgtatccaacatc
gcagagactgctaccgggaaggttgaggaatttttcctctttgggtctttcctggaggcc
acaatgattgacagaaagattggtgataagcccatcaactttgaggtcacaataggttac
tatggaaacgagattgatggtgctgccaggccaaacaagaagggggtgaaagggaaagat
ggcgatgaagaggaaactgagctgatccacaactccagtgaggaggagttggatgatgac
ggggacctaacttcagtggcgactactcctcccatgaaacccgtcatcactgaccgaaac
tactttcacctgccgtattttgagaggaagccgtgtgtctacattaaaagttggtggcag
gaccaaagaaggaggctgtacaatgccaacattatcgacaacattgcggataaactggag
gatggactgaatgacgtgcaagagatcatcaagaccgagaagacctatcctgagcgcaga
ctaagaggcgtcctagaggaactcagccagggttgtagtcagtttcttttgctggcaaac
aaggaccaaaattcatctggcagaaccaaacttgacagggagagactgaaactgtgcatg
tcagaagtggagagcatcggccagcaagctaaagccatgaggtcacaggtgaagaaaagc
acagtgagagataaaatcaagctggctcagaacttcctcacaaagctgcgctttctggct
gaagaacctcaacacagcgttcctgatgttttcatatggatgataagtaatggaaagcgc
attgcttatgcacgcgttccatccaaagacatcctttattccagtatagaggaggagaca
ggaaaggactgtggcaaagtcaagacaatctttctgaggatccctggtaagaaaggtttt
gggcctgctggctggacagtccagtccaagatagagatttatctgtggctgggtctgact
agacagcgcaaagactacttgaagggcctgcccaatggatttgaggaaaataagttgtcc
aaaggacctggcatgccatgctcaccccccatcagcctcacctacatgatgaaacagatc
ttccagctgcgggcccacatgtaccaagctcgcagcctgtttgctgctgatagcacaggt
ctgtctgatccctttgcaagaattttcttctccacacaaagccaggtcactgagattctt
cctgagactctgtgcccgacatgggaccagctgctggtctttgagaatgtggagttgttt
ggagaggccatcgaactgagagacgaccctcctattattgtcattgaactctatgatcaa
gacacagtgggtaaagcagaattcatgggcagaacatttgccaaacctgtggtaaagatg
gcggatgagcattatggtcccccacgctttcctcctcaactggagtactatcagatctac
cgtgggaactgcaccgctggagaaatgctggcagcctttgaactgctgcagattggtccc
aatgggaaagctgacctgcctcccatagacggtcccacagatatggaacgtggcccaatc
ctgcctgtaccgttggggatcagaccagtactcagcaaatacaggatcgaggttttattc
tggggcttgagggacttgaagagggtgaatctggcccaggtggatcggcctcgtgtggac
attgaatgcgcgggaaagggagtacagtcagcccttatcccaaactacaagaaaaacccc
aacttcagcacccttgtcaagtggtttgaagtggatttgcctgagaatgagttgcttcac
ccgccactgaacatccgggtggtggattgcagggcttttggccgctacactctggttggc
tccaatgccgtcacctccctgcggaagttcatctacagggcaaaagacaagcaggctaac
aactggtccactacagaggaaataattgtcgtcaacatagaacctgagtctggttttaag
aagatggacactgtggtcaaactagattcttgtgctgatactgtggtcaaagttgaggat
gatgacaaggatggaaaggggagaaagaagaagagaaagaagggtgatgagattgaagag
gaggaacttgacgagagcatgttggactggtggtccaaatattttgcctccattgaaact
ttgacagaggttctcaaggctcaagaagctgctctttcagattcagaggacaaagatgag
atggacattgcagatggcggagatatcaaacttgatgactctcctgtgaaaggcaccaag
aaaggaaaaggaaagaagaaaaaggagaagccgggaatcgatccatttgagaagaaaaag
ccaaagctggatgaactaaaggtgtaccctaaggaactggagagtgaatttgacaacttt
gaagactggctccacagctttaacctgtacaggggaaaaggtggtgatgatgaggaccaa
aacatgatggatgaggacagaattgttggaaaattcaaaggctcactgtgcatgtacaaa
gtgtcggatgacatgcccagagacatgagcctcgactccaacatgggaatgtttcagaac
attcctcacaacgatcccattaatattcttgtccgcatctacatcatcagggcaactgat
ctgcatccagctgacattaatgggaaagctgatccatacattgcaatcaaactggggaag
acagagatcaaagacaaagagaactacatctcaaaacagctgaaccctttgtttggcaaa
tcctttgatgtagaggccacattcccaatggattccacactcacagtgtcaatttatgac
tgggacctggttggaacagatgatctgattggagaaaccaagcttgaccttgagaaccgt
ttctacagcaagcacagggctacatgtggtgtggcatgtaactacgccatccatggttac
aatgtgtggcgggacccaatgaaacccacacaaatcctggctaagttgtgtaaggacggc
aaactggatgggcctcactacggccctgcaggacgagtgaaggtggagaaccgtgtcttc
atagcaccgactgagctagaggatgaaaacggtttgaagaagcagacagatgaacatgtg
gctctgaccgtattgaaccactgggaggaaatcccacgggtcggctgcaaacttgtccca
gaacatgtggaaaccagaccactgcaccaccctgataaaccagggattgaacaagggaga
attgagatgtgggtggatatgttccctaaggacatgactgcacctgcccctgcccttgat
atttcaccaaggaaaccaaagaagtttgaacttagggtaatcatctggaacacagatgag
gttgttctagaggatgatgacatcttcactggcgagaaatcgagtgacatatttgtgaga
ggctggttaaaagggcagcaggaggacaagcaggacacagatgtccactatcactccatc
actggggagggcaacttcaactggcgctttgtctacccctttgactacctcatggccgaa
gagaagatcgtcatctcaaaaaaagagtccatgtttgcctgggatgagactgaatacaag
atcccagctcgccttaatctgcaagtgtgggacgctgaccatttctctgcagatgacttc
ttaggtgcaattgaaattgacctgaaccgttttccacgtggggcaaagacagccaagcag
tgcaccattgagatggtgacaaatgaagcggagatgcccatggtctccatcttcaaacag
aagaggatcaaaggctggtggccatttgttgccagaaatgaagatgacgagtttgaactc
acgggaaaagtggaagcagagctgcacctcctgacaggagaggaagcagagagaagtcca
gttggtgaaggacgcaacgaaccagacccactggagaaacccaaccgcccagacaccagc
cttctgtggttcctcactccactcaaagctattagaaacttggtctgcaaccagtacagg
tggctgaccatcaagattgtcagtgctctcctgctgctggccatgctggctcttttcctc
tacaacatgcctggttacatggtgaagaaaatgctgggagcttga
DBGET
integrated database retrieval system
