Etheostoma spectabile (orangethroat darter): 116671420
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Entry
116671420 CDS
T08457
Name
(RefSeq) interferon regulatory factor 3-like isoform X1
KO
K05411
interferon regulatory factor 3
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04620
Toll-like receptor signaling pathway
esp04621
NOD-like receptor signaling pathway
esp04622
RIG-I-like receptor signaling pathway
esp04623
Cytosolic DNA-sensing pathway
esp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
116671420
04621 NOD-like receptor signaling pathway
116671420
04622 RIG-I-like receptor signaling pathway
116671420
04623 Cytosolic DNA-sensing pathway
116671420
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116671420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116671420
04131 Membrane trafficking [BR:
esp04131
]
116671420
Transcription factors [BR:
esp03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
116671420
Membrane trafficking [BR:
esp04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
116671420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
116671420
NCBI-ProteinID:
XP_032358554
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All DBs
Position
21:complement(20449826..20459359)
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AA seq
466 aa
AA seq
DB search
MSHSKPLLIPWLRTKIDSERYPGVHWTNPDRTEFAIPWKHALRQDSSDTDILIFKAWAEV
SGNGRAHGDPSVWKRNFRSALRAKGFKMVSDNKNDAANPHKVFRWPAESPSGATSSAGSQ
DQDDPNLFEDYPLPTQERQVIPCFDGPLYLPEDTVFSAESSANHDLLQECLMGLNIGPET
EGTAGFEPPPEQQQLQNPVVIGGRALPGQQQYPVMFEGSVGEAGLPEQPAHPMEGAMGGA
NDGHLAEQFLHTMTQTSYGENFKTQFRILVYYRGVMVSEQEVQNEVGIRLVYRPELKGTA
LDHESGLTLVSLPSPGQMLDHTQANLTQRILDKLGDGLDVGVSGHVVYGQRLGEIKAFWS
FSKFDSSRQPQEISKLEPQPIYHFKDFVRGILEFIEGKNCPPCSLFFCLGEKWPDSDNRP
WEKKLITVEVVLTSMELLKNMAVEGGASSLQSMELQMSLEEMMEMY
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtctcattctaaaccactgctcatcccgtggctgcggaccaagattgacagcgaaagg
tatcccggtgtccactggacaaacccggacaggacagagttcgccatcccgtggaaacat
gctttaagacaggactcctccgacactgacatcctcatctttaaggcctgggcagaggta
agtggcaatggccgggctcatggagacccctcggtctggaagaggaacttccgcagcgcc
ctccgagccaaaggcttcaaaatggtctctgacaacaagaacgacgctgctaacccccat
aaagtgtttcgctggccggccgagtcaccatcaggagcgacctcttctgctggatcccag
gaccaagatgaccccaatttgtttgaggattatccccttcctacacaagaaaggcaggtc
attccatgctttgatggccctctctatcttccagaagacactgtgttttcagcagaatcc
tctgccaaccatgatcttctccaggagtgtctaatgggactgaacattggccctgaaaca
gagggcaccgcaggctttgagcctcctccggagcaacagcagctccaaaacccagttgtg
attggtggacgcgcgttgcctgggcaacagcagtatccagtaatgtttgagggttcagtc
ggtgaagctgggttgcctgagcaaccggcacatccaatggagggagccatgggaggggcc
aatgatgggcatctggcagagcagttcctacatacaatgacccaaaccagttatggagag
aatttcaagactcaattcaggatattagtgtactacagaggggtgatggtgtctgagcag
gaggttcagaatgaagttggtatccgcttagtctacaggcctgaactcaaggggacagct
ttggatcacgagtcaggcctgaccctggtctctctgccaagccctggacaaatgctggat
catacccaagccaatctgacccaacgcatcctggacaagctgggcgatggtttggacgtg
ggggtgtcaggccatgtggtctacggccagcgacttggtgaaatcaaagcattttggagc
ttctccaagtttgatagcagcaggcagccacaagagatttctaaactggagcctcaacca
atataccacttcaaggactttgtgcgaggtatattggaattcattgaagggaaaaattgc
cctccgtgctccctgttcttctgcctcggtgagaagtggcctgactcagacaaccggcct
tgggagaagaaactcatcacagtggaggtggtcctgacttcaatggagctactgaagaat
atggcggttgaaggcggcgcctcatccctgcagtcgatggagctgcagatgtcccttgaa
gagatgatggagatgtactga
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integrated database retrieval system
