Etheostoma spectabile (orangethroat darter): 116678219
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Entry
116678219 CDS
T08457
Name
(RefSeq) sodium channel protein type 4 subunit alpha B-like
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
esp04040
]
116678219
Ion channels [BR:
esp04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
116678219
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
116678219
NCBI-ProteinID:
XP_032364130
LinkDB
All DBs
Position
Unknown
AA seq
1739 aa
AA seq
DB search
MALVLPPVGSEIFRRFTPSSLEEIQKRQEVEEERQRRKEKNIEIAEEDLPKPASDLEAGK
PLPFIYGDPPPELFNTPLEELDPFYQSQKTFIVIGKGNIIYRFNAEPACYLLSPFSPLRT
IAIKILIHSLFSLFIMLTIITNCAFMTMSDPPAWSKAVEYVFTFIYTFEATIKVVSRGFC
VGGFTFLKDPWNWLDFMVISMAYLTEFIDLGNVSVLRTFRVLRALKTITVIPGLKTIVGA
LIQSVKKLADVMILTVFCLCVFALIGLQLFMGNLRQKCVLMPPLLLSNHTSDIGLNTTYD
GNDTHSNRTGSDDFDYNEFINNPENFYFLPGQLDALLCGNSSDAGVCPDGYVCLKAGRNP
NYGYTSYDSFGWAFLALFRLMTQDFWENLFQLTLRAAGKTYMIFFVVIIFLGSFYLINLI
LAVVAMAYAEQNEANMAEAKQKEEEYAQILELLKKRQEEQAACRAEDSSGDAVQHEPEHT
AMEEFADDQKPCPPCWYAFADIFLKWNCCGCWRWLKSWLYTIVMDPFVDLGITICIVLNT
VFMAMEHYPMTEDFQELLSIGNLVFTVIFTAEMVLKLLAMDPYYYFQVGWNIFDSIIVTM
SLVELGLANVEGLSVLRSFRLMRVFKLAKSWPTLNMLIRIIGRSVGALGNLTLVLAIIVF
IFAVVGMQLFGKNYKDCVCRISLDCTLPRWHMFDFFHAFLIIFRVLCGEWIETMWDCMEV
SGQTMCLIVFMMVMVIGNMVVLNLFLALLLSSFSGDNLAAPEEEGENNLQIAINRINIAV
AWTKSQILQQVSTLRGKNKDLDPEHTAVRGGEVDGTTKDCLVLTSGSEVKTLDCNHGNSL
KLGCLRVPIAEAESDFETPDIDEEEEEDEVDEDNEEKLSKGDGSSVCSTVQRVPDIQEDE
DDEDDPNTPVDCYSDEWYRRCPFLDVDTSQGRGKVWSNIRRTCFCVVEHNYFESFIIFMI
LLSSGALAFEDIYLEQRRVIKTVLEYADQVFTYVFVVEMVLKWVAYGFKTYFTNAWCWLD
FLIVDVSLVSLTANILGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIF
NVLLVCLIFWLIFSIMGVNLFAGKFYHCFNETSEEPFPPEIVNNRTECLALVQGNVGGVR
WRNVKVNYDNVGMGYLALLQVATFKGWMDIMYAAVDSRDVESQPMYEDNLYMYIYFVIFI
IFGSFFTLNLFIGVIIDNFNQQKSKLGGKDIFMTEEQKKYYNAMKKLGSKKPQKPVPRPE
NKFQALVFDLVTTQVFDIFIMVLICLNMVTMMVETDEQSEEKVLILYWINLVFIVIFTGE
CTLKMTALRQHYFSVGWNIFDFVVVILSIVGLLLADIIEKYFVSPTLFRVIRLARIGRVL
RLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVRKEAMIDDMFNF
ETFGNSMICLFMITTSAGWDGLLSPIMNTPPDCDPDLENPGSAVRGDCGSPGIGIVFFTT
YIIMSFLVVVNMYIAIILENFNVATEESGDPLCEDDFEMFYETWEKFDPDASQFIQYSKL
SDFCDTLKDPLRIPKPNTVKLIHMDLPLVPGDKIHCLDILLALTAQVLGDAGGMDALKAS
MEEKFMANNPSKVSYEPISSTLRRKQEDVAASVIQRAYRKHLLQRTLKLASYKYRAKTDG
HGEAPPETQGLLCQRISRLYGEEPGPGPVELQREFVLHAVPPLNATNGFPDESLRESVV
NT seq
5220 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgtactaccccctgttggttcagagatcttcagacgattcacaccatcctcg
ctggaggaaatacaaaaacgacaggaagtggaggaggagcgccagaggaggaaggagaaa
aacattgagattgcagaggaagatcttcctaaaccagccagtgatcttgaggctgggaag
ccgctcccattcatctatggagacccgccccctgagctgttcaacaccccattggaggag
ctggatcccttctaccaatcacagaagacattcatcgtgattggtaaaggtaacataatc
taccgttttaacgccgagccagcctgttaccttctgagtccgttcagtccgctacggacc
attgctatcaagatcctcatccactctttattcagtttgttcatcatgttgacaatcatc
accaactgtgcgtttatgactatgagtgatcctccagcgtggagcaaagccgtcgagtac
gtctttacattcatttacacgtttgaagcaacgatcaaagtggtgtcgcgaggattctgt
gttgggggcttcaccttcctcaaagacccgtggaactggctggactttatggtcatcagc
atggcatacctgaccgagttcattgatctgggaaatgtttctgtgctgaggacgttcaga
gtacttcgagctctgaagaccatcacagtcatccctggtctgaagacgattgtcggagct
ctgatccaatcagtgaagaagctagctgatgtcatgattctgaccgtgttctgcctctgc
gtcttcgctttgattggcctgcagctcttcatgggaaacctgcggcaaaaatgtgtcctg
atgccgccactgttgcttagcaaccacacgtctgacattggccttaacaccacttacgat
ggcaatgacacccacagcaacaggacaggaagcgatgactttgattacaacgagttcatc
aacaacccagagaacttctacttcctgcctggtcaactcgatgctctgctatgtgggaac
agttcggacgccggggtctgtccagatggatacgtctgtctgaaagcagggagaaaccct
aactacggctacaccagctacgactcattcgggtgggccttcctggctctgttcagactg
atgacccaggacttctgggaaaacctcttccagctgacgctgcgtgcagcaggtaaaacc
tacatgatcttctttgtggtcatcatcttcctcggctcgttctacctcattaacctgatc
ctggccgtggttgccatggcgtacgccgagcagaacgaggccaacatggcagaggccaaa
cagaaggaggaagagtacgctcagatcctggagctgctgaagaagagacaggaggagcag
gcggcctgcagggcggaggattcatctggagacgcagtccaacacgagccagaacatact
gccatggaagagttcgctgatgaccagaagccgtgcccaccgtgttggtatgccttcgct
gacatcttcctcaagtggaactgctgcggctgttggcggtggctcaaatcgtggctctac
accatcgtcatggacccgttcgtggacctcggcatcaccatctgcatcgtcctcaacacc
gtctttatggccatggagcactatccaatgaccgaggacttccaggagcttctgagcatc
ggaaatctggtgtttacagtgatcttcacagctgagatggtcctcaaacttctggccatg
gacccgtactactacttccaggtgggctggaacatcttcgacagcatcatcgtcaccatg
agtctcgtggagctcggactggcgaacgtcgaggggctgtcggtgctgcgctccttcaga
ctgatgcgagtgtttaagctggccaagtcctggccgaccctgaacatgctgatcaggatc
attgggcggtctgtaggggctctggggaacctgaccctggtgctggccatcatcgtcttc
atctttgccgtggtcggcatgcagctgtttggaaagaactacaaagactgcgtgtgccga
atctcgctcgactgcactctcccccgctggcacatgttcgacttcttccacgccttcctc
atcattttccgagtgctgtgtggggagtggattgagaccatgtgggactgcatggaggta
tcgggccagaccatgtgtctgatcgtcttcatgatggtcatggtgatcgggaacatggtg
gtcttgaatctgttcctggctttgttgctgagctcgtttagtggagataatcttgcggct
ccagaagaagaaggagaaaacaacttgcagattgccataaaccggatcaacatagccgtg
gcttggaccaagtcccagatcctccaacaagtctcgacgttaagggggaagaataaggac
ctggacccagaacacaccgcggtccgcgggggagaagtcgacgggacgacgaaggattgt
ttggttttgacctctgggtcagaggtgaagaccctcgactgtaaccatggcaacagcctc
aaacttggctgcctgagggtccccatcgccgaggccgagtcggactttgagacgccggac
atcgatgaagaagaagaagaggatgaagtggacgaagacaatgaagaaaaactctctaaa
ggtgacggctcgtcggtctgcagcactgtccagagagttccagacatccaggaggacgaa
gacgatgaagatgatccaaacacacctgtggactgctatagtgacgagtggtaccgccgc
tgtccgttcctggacgtagacacgtcccagggcagagggaaggtctggtctaacatcagg
agaacctgcttctgcgttgtggaacacaactactttgagagcttcatcatttttatgatc
ctgttgagcagtggagctctggcgtttgaagacatctacctggagcagcgccgtgtcata
aagacagttctggagtacgcagaccaggtgttcacctacgtgtttgtggtggagatggtt
ctgaagtgggtcgcctacgggttcaagacgtacttcaccaacgcctggtgctggctcgac
ttcctcatcgtagatgtgtctctggtgtcactgacagcaaacatcctggggtactctgag
ctgggagccatcaagtctctgaggacactgagagctctgaggcccctgagggccctgtct
cgctttgagggaatgagggtggtggtgaatgcgctggtgggggccatcccatccatcttc
aacgtgctgctggtgtgtctgatcttctggctgatcttcagcatcatgggtgtcaatctg
ttcgccgggaagttttatcactgcttcaacgagacgtcggaagagccgttcccccctgag
atcgtcaacaaccggaccgagtgtctggccctggtccaggggaatgtcgggggggtccgc
tggaggaacgtcaaggtcaactacgacaacgtggggatgggctacctggcgctgctgcag
gtggccacgtttaaaggctggatggacatcatgtacgcagcggtggactccagagacgtg
gagtcccagccaatgtatgaggacaatctctacatgtacatttactttgtcatcttcatc
atcttcggctccttcttcactcttaacctcttcatcggagtcatcatcgacaacttcaac
cagcagaaatcaaagttgggaggaaaagatatcttcatgacagaagagcagaagaaatat
tacaacgccatgaagaagcttggctccaagaaacctcagaaacctgttccacgacctgag
aataagttccaggccctggtgtttgacctggtgaccacgcaggtgtttgatatcttcatc
atggtgttgatctgtctcaacatggtgacgatgatggtggagacggacgagcagagtgag
gaaaaggtcctgatcctgtactggatcaacctggtcttcatcgtcatcttcaccggagag
tgcacgctgaagatgacggcgctccgtcaacactacttctccgtgggctggaacatcttc
gacttcgtggtcgtcatcctgtccatcgtaggcctgctcctcgctgacatcatagagaag
tattttgtctcgcccacgctcttccgtgtgatccgattggctcgtatcggccgggtcctt
cgtctcattcgtggagccaaggggatccggacactgctgttcgccctgatgatgtcactt
cctgcgctcttcaacatcggcctgctactcttcctcatcatgtttatcttctccatcttc
ggcatgtccaacttcgcctacgtgcgtaaggaggcgatgatcgacgacatgttcaacttc
gagacgtttgggaacagcatgatctgtctgttcatgatcaccacgtcggccggctgggac
gggctgctgagccccatcatgaacacgccgccggactgcgaccccgacctggagaacccg
ggttccgcggtgcggggcgactgtggcagcccggggatcggcatcgtcttcttcaccacc
tatatcatcatgtccttcctcgtggtggtcaacatgtacatcgccatcatcctggagaac
ttcaacgtagcgacggaggagagcggcgacccgctgtgcgaggacgacttcgagatgttt
tatgaaacttgggagaagtttgacccggatgcttcccagttcatccagtacagtaaactg
tcagatttctgcgacaccctgaaggatcctctgaggattcccaaaccaaatacagtcaaa
ctgatccacatggatctaccgctggttcctggagacaaaatccactgtctggacatcctg
ctagctctcactgcccaggtgttaggtgatgccggaggaatggatgctcttaaagcaagc
atggaggagaagttcatggccaacaacccatccaaggtgtcctatgaaccaatcagcagc
actttgcggaggaaacaggaagatgtggcggcgtcagtgatccagagagcgtacaggaaa
cacctgctgcagcggacgctcaaactggcgtcctacaaataccgagcaaagacggacggc
cacggagaggcgccgcccgagacccaagggctgctctgccagcgaatcagccggctgtac
ggagaggagccggggcccggcccagtggagcttcagagagagtttgtcctccacgctgtt
cctcctctcaacgccaccaacggtttcccagatgagagcctgagggagtcagtcgtctga
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integrated database retrieval system
